FC871219

Overview
NameFC871219
Unique NameFC871219
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length438
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7520 contig Csv1_Contig7520:583..1020. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871219 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.265e-19
Identity = 50/73 (68.49%), Postives = 53/73 (72.60%), Query Frame = 2
Query:    2 KIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXSGAGPKIEEVD 220
            KIEDAI+QAIQWLD NQLAEA+EFEDKMKELES+CNPIIAKMYQ                   GAGPKIEEVD
Sbjct:  575 KIEDAIEQAIQWLDGNQLAEAEEFEDKMKELESLCNPIIAKMYQ---GAGGDMDDEGPAPSGGGAGPKIEEVD 644          
BLAST of FC871219 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.158e-19
Identity = 50/77 (64.94%), Postives = 55/77 (71.43%), Query Frame = 2
Query:    2 KIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ----XXXXXXXXXXXXXXXXXXSGAGPKIEEVD 220
            +IEDAID+AI+WLD+NQLAEADEFEDKMKELESICNPIIAKMYQ                      +GAGPKIEEVD
Sbjct:  575 RIEDAIDEAIKWLDNNQLAEADEFEDKMKELESICNPIIAKMYQGGAGGATMDEDGPSVGGSAGSQTGAGPKIEEVD 651          
BLAST of FC871219 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 4.808e-19
Identity = 47/71 (66.20%), Postives = 50/71 (70.42%), Query Frame = 2
Query:    2 KIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXSGAGPKIEE 214
            KIE+AID +IQWLD NQLAEADEF+DKMKELESICNPIIAKMYQ                   GAGPKIEE
Sbjct:  575 KIEEAIDASIQWLDGNQLAEADEFDDKMKELESICNPIIAKMYQGAGGDMGGGMEDEGPTSGGGAGPKIEE 645          
BLAST of FC871219 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 4.808e-19
Identity = 50/77 (64.94%), Postives = 53/77 (68.83%), Query Frame = 2
Query:    2 KIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ----XXXXXXXXXXXXXXXXXXSGAGPKIEEVD 220
            KIED+I+QAIQWL+ NQLAEADEFEDKMKELESICNPIIAKMYQ                       GAGPKIEEVD
Sbjct:  575 KIEDSIEQAIQWLEGNQLAEADEFEDKMKELESICNPIIAKMYQGAGGEAGGPGASGMDDDAPPASGGAGPKIEEVD 651          
BLAST of FC871219 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 8.202e-19
Identity = 49/74 (66.22%), Postives = 51/74 (68.92%), Query Frame = 2
Query:    2 KIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ-XXXXXXXXXXXXXXXXXXSGAGPKIEEVD 220
            KIEDA+DQAI WL+SNQLAE DEFEDKMKELE ICNPIIAKMYQ                   S AGPKIEEVD
Sbjct:  577 KIEDAVDQAISWLESNQLAEVDEFEDKMKELEGICNPIIAKMYQGAGGDAGVPMDDDAPPSGGSSAGPKIEEVD 650          
BLAST of FC871219 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.386e-18
Identity = 48/75 (64.00%), Postives = 53/75 (70.67%), Query Frame = 2
Query:    2 KIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXS--GAGPKIEEVD 220
            KIED+I+ AI+WL++NQLAE DEFEDKMKELESICNPIIAKMYQ                  S  GAGPKIEEVD
Sbjct:  575 KIEDSIEAAIEWLEANQLAECDEFEDKMKELESICNPIIAKMYQGGEAGGPAAGGMDEDVPPSAGGAGPKIEEVD 649          
BLAST of FC871219 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 3.117e-18
Identity = 47/79 (59.49%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    2 KIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ------XXXXXXXXXXXXXXXXXXSGAGPKIEEVD 220
            K+ED+I++AIQWLD NQL EADEFEDKMKELES+CNPIIAKMYQ                         GAGPKIEEVD
Sbjct:  575 KVEDSIEEAIQWLDGNQLGEADEFEDKMKELESVCNPIIAKMYQGGAGGEAGGPGASGMDEDEAPPASGGAGPKIEEVD 653          
BLAST of FC871219 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 3.117e-18
Identity = 48/75 (64.00%), Postives = 51/75 (68.00%), Query Frame = 2
Query:    2 KIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY--QXXXXXXXXXXXXXXXXXXSGAGPKIEEVD 220
            KIEDA+D AI WLDSNQLAE +EFEDKMKELE ICNPIIAKMY  +                  SGAGPKIEEVD
Sbjct:  571 KIEDAVDGAISWLDSNQLAEVEEFEDKMKELEGICNPIIAKMYXGEGAGMGAAAGMDEDAPSGGSGAGPKIEEVD 645          
BLAST of FC871219 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.003e-16
Identity = 44/73 (60.27%), Postives = 49/73 (67.12%), Query Frame = 2
Query:    2 KIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXSGAGPKIEEVD 220
            KIE A++ AIQWL+ NQ+AE DEFEDK KELE ICNPIIAKMYQ                  +GAGPKIEEVD
Sbjct:  574 KIEKAVEDAIQWLEGNQMAEVDEFEDKQKELEGICNPIIAKMYQ-GAAGPGGDVPMGADMPAAGAGPKIEEVD 645          
BLAST of FC871219 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.502e-15
Identity = 41/79 (51.90%), Postives = 50/79 (63.29%), Query Frame = 2
Query:    2 KIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ------XXXXXXXXXXXXXXXXXXSGAGPKIEEVD 220
            KIE A+++AI+WL+ NQLAE DE EDK+KELE +CNPIIA++YQ                        SGAGPKIEEVD
Sbjct:  577 KIETAVNEAIEWLEKNQLAEVDELEDKLKELEGLCNPIIARLYQGRGDVPIGGPGDMPGGGYGGSRGSSGAGPKIEEVD 655          
The following BLAST results are available for this feature:
BLAST of FC871219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
HSP72_SOLLC1.265e-1968.49Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7C_PETHY2.158e-1964.94Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP7E_SPIOL4.808e-1966.20Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP71_ARATH4.808e-1964.94Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP71_SOLLC8.202e-1966.22Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP73_ARATH2.386e-1864.00Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP72_ARATH3.117e-1859.49Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP70_MAIZE3.117e-1864.00Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_SOYBN1.003e-1660.27Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_DAUCA5.502e-1551.90Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AG03FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2AG03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871219 ID=FC871219; Name=FC871219; organism=Citrus sinensis; type=EST; length=438bp
GAAGATTGAAGATGCGATCGACCAGGCCATCCAATGGTTGGACAGCAACC
AGCTTGCAGAGGCTGATGAGTTTGAGGATAAGATGAAGGAATTAGAGAGC
ATCTGCAACCCCATCATTGCAAAGATGTACCAGGGTGCCGGTGGTGACAT
GGGTGGTGCCATGGATGACGATGTTCCTGCTGGTGGTAGCGGTGCTGGCC
CCAAGATTGAGGAGGTAGACTAAGCAGCTCTCGTTTTCTGCTGGCTTTTG
TCTGTTGAGGGTTAAGTTGGTAGGGTGATTAGATGTTTCGGAATTTTAAT
TTTATTTTCATGCTTTTGACTATTATTGGGTTTTGATTGATCTTTTACAA
GTCTGTTCAAAAGCCCATTGCAAGTGTTCTCTATGTTTTCTCAATATACT
TTTTTTCATCTATTGCGGACTAAAAAAAAAAAAAAAAA
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