DR912050

Overview
NameDR912050
Unique NameDR912050
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length192
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR912050 vs. ExPASy Swiss-Prot
Match: SPCS2_ARATH (Probable signal peptidase complex subunit 2 OS=Arabidopsis thaliana GN=At2g39960 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.930e-22
Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = 3 
Query:    3 SSKLPRFSDLYTLTVSSADPKSISAGQPVEFTKSVTQWFAKDGVLVEGLFWKDVFALLDEYA 188
            SSKLPRFSD YTLT+ SADPKSISAG+ V+ TKSVTQWF KDGVLVEGLFWKDV AL+  YA
Sbjct:  123 SSKLPRFSDQYTLTIDSADPKSISAGKSVQLTKSVTQWFTKDGVLVEGLFWKDVEALIKNYA 184
The following BLAST results are available for this feature:
BLAST of DR912050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SPCS2_ARATH1.930e-2280.65Probable signal peptidase complex subunit 2 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_20178 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-10_A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR912050 ID=DR912050; Name=DR912050; organism=Citrus sinensis; type=EST; length=192bp
TTTCTTCTAAATTGCCAAGATTTTCTGATCTCTACACGCTGACAGTATCG
AGTGCGGATCCAAAATCAATTTCTGCTGGGCAACCAGTAGAGTTTACTAA
AAGCGTCACCCAGTGGTTCGCCAAAGATGGAGTTCTGGTGGAGGGCTTAT
TCTGGAAAGATGTTTTCGCACTCCTTGATGAATATGCCATAG
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