FC871218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871218 vs. ExPASy Swiss-Prot
Match: PUB19_ARATH (U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.639e-16 Identity = 47/121 (38.84%), Postives = 75/121 (61.98%), Query Frame = 2 Query: 17 DSLAVLANLAEDIQGTSTILKTSALPVIIGLL-QTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTDGTSQARKKARSLIKILHKFFETCSSGVEGSAVPHERPFHVW 376 DS+A+LA +AE G ++L+ L + + +L + S A K++CV++LL+LC N +V SLAK+PS+M SLY+ +++G KKA +LIK++H+F E +G + ER H W Sbjct: 567 DSMAILAKMAEYPDGMISVLRRGGLKLAVKILGSSEVSPATKQHCVALLLNLCHNGGSDVVGSLAKNPSIMGSLYTASSNGELGGGKKASALIKMIHEFQER-KTGPGEPVLERERFVHAW 686
BLAST of FC871218 vs. ExPASy Swiss-Prot
Match: PUB18_ARATH (U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.199e-12 Identity = 42/125 (33.60%), Postives = 69/125 (55.20%), Query Frame = 2 Query: 8 LITDSLAVLANLAEDIQGTSTILKTSALPVIIGLLQTLTSR--AGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTDGTSQARKKARSLIKILHKFFETCSSGVEGSAVPHERPFHVW 376 L D LA LA LAE GT +++ L + + +L + A K++CV ++L+LC N +V L K+ +M SLY++ ++G KKA +LI+++H+F E + VE + + R H W Sbjct: 574 LTADCLATLAKLAEYPDGTIGVIRRGGLKLAVKILSSSEDSPVAVKQHCVGLILNLCLNGGRDVVGVLVKNSLVMGSLYTVLSNGEYGGSKKASALIRMIHEFQERKTGSVEPN-LQRGRFVHAW 697 The following BLAST results are available for this feature:
BLAST of FC871218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871218 ID=FC871218; Name=FC871218; organism=Citrus sinensis; type=EST; length=589bpback to top |