DR912034

Overview
NameDR912034
Unique NameDR912034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length196
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR912034 vs. ExPASy Swiss-Prot
Match: CML13_ARATH (Probable calcium-binding protein CML13 OS=Arabidopsis thaliana GN=CML13 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.218e-17
Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 2 
Query:   65 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQA 193
            LSDDQVSSMKEAF LFDTDGDGKIAPSELGILMRSLGGNPTQA
Sbjct:    6 LSDDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTQA 48
[Close]
BLAST of DR912034 vs. ExPASy Swiss-Prot
Match: CML14_ARATH (Probable calcium-binding protein CML14 OS=Arabidopsis thaliana GN=CML14 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.738e-15
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 2 
Query:   65 LSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQA 193
            LS+DQVSSMKEAF LFDTDGDGKIAPSELGILMRSLGGNPT++
Sbjct:    6 LSNDQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTES 48
[Close]
BLAST of DR912034 vs. ExPASy Swiss-Prot
Match: CML7_ORYSJ (Probable calcium-binding protein CML7 OS=Oryza sativa subsp. japonica GN=CML7 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.873e-15
Identity = 36/44 (81.82%), Postives = 44/44 (100.00%), Query Frame = 2 
Query:   62 DLSDDQVSSMKEAFTLFDTDGDGKIAPSELGILMRSLGGNPTQA 193
            +LS++QV+SM+EAF+LFDTDGDG+IAPSELG+LMRSLGGNPTQA
Sbjct:    5 ELSEEQVASMREAFSLFDTDGDGRIAPSELGVLMRSLGGNPTQA 48
The following BLAST results are available for this feature:
BLAST of DR912034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CML13_ARATH9.218e-1797.67Probable calcium-binding protein CML13 OS=Arabidop... [more]
CML14_ARATH1.738e-1590.70Probable calcium-binding protein CML14 OS=Arabidop... [more]
CML7_ORYSJ3.873e-1581.82Probable calcium-binding protein CML7 OS=Oryza sat... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_20162 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-04_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR912034 ID=DR912034; Name=DR912034; organism=Citrus sinensis; type=EST; length=196bp
TGAAAATCCGAAAAAATAAATAAATAAATAAAAAGGAAAAAAGAGAAAGG
AAATGGGAAAGGATCTGAGCGACGACCAGGTCTCGTCAATGAAGGAAGCC
TTCACATTGTTCGACACTGACGGTGACGGAAAGATCGCGCCGTCTGAGCT
AGGGATCCTAATGAGGTCACTCGGGGGAAACCCGACCCAGGCCCCC
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