EY680233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680233 vs. ExPASy Swiss-Prot
Match: TMED2_MOUSE (Transmembrane emp24 domain-containing protein 2 OS=Mus musculus GN=Tmed2 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.031e-11 Identity = 49/192 (25.52%), Postives = 93/192 (48.44%), Query Frame = 2 Query: 125 IAAILAFIFSPQAVYGIRFVIDREECFSHNVQYEGDTVHASFVVIKADSSWYSSHDGVDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHETIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMNRKAV*QAFWESTALVGASVPQVYPL 694 + A+LA + + + Y + EECF V G + F V A+ + +D+ + GP + I+ + S K+ F AH G ++FCF+N+ + + + F + +G + + H N L E I++L A+ ++ EQ ++E + +N+ N + V +F+E+ LV ++ Q+Y L Sbjct: 7 LLALLAALLATASGYFVSIDAHAEECFFERVT-SGTKMGLIFEV--AEGGFLD----IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYL 191
BLAST of EY680233 vs. ExPASy Swiss-Prot
Match: TMED_NEMVE (Transmembrane emp24 domain-containing protein OS=Nematostella vectensis GN=v1g194562 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.759e-11 Identity = 50/189 (26.46%), Postives = 87/189 (46.03%), Query Frame = 2 Query: 134 ILAFIFSPQAVYGIRFVIDREECFSHNVQYEGDTVHASFVVIKADSSWYSSHDGVDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHETIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMNRKAV*QAFWESTALVGASVPQVYPL 694 +L F+ Y I EECF H+ G + F V A+ + +D+ + GP I+ + S K+ F AH G + +CF+NK + + + F + +G + + L E +S+L EA+ ++ EQ ++E + +N+ N + V +F+ES LV ++ QVY L Sbjct: 12 VLMFLARSSLCYFITIDAHGEECF-HDKVTSGTKMGLIFEV--AEGGFLD----IDVKIIGPDQKVIYSGERETSGKYTFAAHMDGTYNYCFSNKMSTMTPKVLKFSMDIGEAPKDTSKEDNAGHDKLSEMVSQLSEAMTGVKHEQEYMEVRERIHRSINDNTNSRVVWWSFFESLVLVAMTLGQVYYL 193
BLAST of EY680233 vs. ExPASy Swiss-Prot
Match: TMED2_CRIGR (Transmembrane emp24 domain-containing protein 2 (Fragment) OS=Cricetulus griseus GN=TMED2 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.297e-11 Identity = 48/192 (25.00%), Postives = 92/192 (47.92%), Query Frame = 2 Query: 125 IAAILAFIFSPQAVYGIRFVIDREECFSHNVQYEGDTVHASFVVIKADSSWYSSHDGVDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHETIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMNRKAV*QAFWESTALVGASVPQVYPL 694 + +LA + + + Y + EECF V G + F V A+ + +D+ + GP + I+ + S K+ F AH G ++FCF+N+ + + + F + +G + + H N L E I++L A+ ++ EQ ++E + +N+ N + V +F+E+ LV ++ Q+Y L Sbjct: 2 VLVLLAALLATASGYFVSIDAHAEECFFERVT-SGTKMGLIFEV--AEGGFLD----IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYL 186
BLAST of EY680233 vs. ExPASy Swiss-Prot
Match: TMED2_RAT (Transmembrane emp24 domain-containing protein 2 OS=Rattus norvegicus GN=Tmed2 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.000e-11 Identity = 48/192 (25.00%), Postives = 92/192 (47.92%), Query Frame = 2 Query: 125 IAAILAFIFSPQAVYGIRFVIDREECFSHNVQYEGDTVHASFVVIKADSSWYSSHDGVDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHETIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMNRKAV*QAFWESTALVGASVPQVYPL 694 + +LA + + + Y + EECF V G + F V A+ + +D+ + GP + I+ + S K+ F AH G ++FCF+N+ + + + F + +G + + H N L E I++L A+ ++ EQ ++E + +N+ N + V +F+E+ LV ++ Q+Y L Sbjct: 7 LLVLLAALLATASGYFVSIDAHAEECFFERVT-SGTKMGLIFEV--AEGGFLD----IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYL 191
BLAST of EY680233 vs. ExPASy Swiss-Prot
Match: TMED2_HUMAN (Transmembrane emp24 domain-containing protein 2 OS=Homo sapiens GN=TMED2 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.918e-11 Identity = 48/192 (25.00%), Postives = 92/192 (47.92%), Query Frame = 2 Query: 125 IAAILAFIFSPQAVYGIRFVIDREECFSHNVQYEGDTVHASFVVIKADSSWYSSHDGVDLVVKGPASDQIHDFRDKISEKFEFVAHHKGVHRFCFTNK--SPYHETIDFDVHVGHFSYYDEHAKDEHFNPLLEQISKLEEALYNIQFEQHWLEAQTERQAIVNEAMNRKAV*QAFWESTALVGASVPQVYPL 694 + +LA + + + Y + EECF V G + F V A+ + +D+ + GP + I+ + S K+ F AH G ++FCF+N+ + + + F + +G + + H N L E I++L A+ ++ EQ ++E + +N+ N + V +F+E+ LV ++ Q+Y L Sbjct: 7 LLVLLAALLATVSGYFVSIDAHAEECFFERVT-SGTKMGLIFEV--AEGGFLD----IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQIYYL 191 The following BLAST results are available for this feature:
BLAST of EY680233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY680233 ID=EY680233; Name=EY680233; organism=Citrus sinensis; type=EST; length=841bpback to top |