DR911869

Overview
NameDR911869
Unique NameDR911869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length229
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR911869 vs. ExPASy Swiss-Prot
Match: APH1_ARATH (Gamma-secretase subunit APH1-like OS=Arabidopsis thaliana GN=At2g31440 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.272e-23
Identity = 52/76 (68.42%), Postives = 59/76 (77.63%), Query Frame = 1 
Query:    1 EDTLDAFADRVGKPRLFLTDKMQIXXXXXXXXXXXXXXFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFV 228
            ED LD+FADR+ +PRLFLTDK+QI              FFCLSLLTPAFGPATFYV+RC ++PFFLISAIIALAFV
Sbjct:   93 EDVLDSFADRISRPRLFLTDKLQIALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVERCSKVPFFLISAIIALAFV 168
The following BLAST results are available for this feature:
BLAST of DR911869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
APH1_ARATH2.272e-2368.42Gamma-secretase subunit APH1-like OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_19997 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-18_E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR911869 ID=DR911869; Name=DR911869; organism=Citrus sinensis; type=EST; length=229bp
GAAGACACGTTGGATGCTTTTGCTGACAGAGTTGGAAAACCACGCTTATT
TCTGACTGATAAGATGCAAATTGCTCTTGCTGGTGGATTAGGCCATGGTG
TGGCCCATGCTGTGTTTTTTTGTCTTAGCCTGTTAACTCCAGCATTTGGT
CCAGCTACATTTTATGTTGACAGATGCCCCCAGATGCCCTTTTTTCTTAT
TTCTGCAATCATTGCTCTTGCATTTGTTA
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