DR911846

Overview
NameDR911846
Unique NameDR911846
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length233
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR911846 vs. ExPASy Swiss-Prot
Match: PUB8_ARATH (U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.232e-12
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1 
Query:    1 GLERAVEVLSILVKCKEGREEMMRVSGCVGVFVKMLKTGSSRAVQXXXXXXXXXXXXXQEICGDSRKEGVLDICMG 228
            GLERAVEVL +LVKC+ GREEM +VSG V V V +L+ G+ + +Q              EI  + ++EGV++IC G
Sbjct:  272 GLERAVEVLGLLVKCRGGREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSGEIVDEVKREGVVEICFG 347
The following BLAST results are available for this feature:
BLAST of DR911846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PUB8_ARATH5.232e-1246.05U-box domain-containing protein 8 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_19974 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-19_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR911846 ID=DR911846; Name=DR911846; organism=Citrus sinensis; type=EST; length=233bp
GGGCTGGAGAGGGCAGTGGAGGTGTTGAGTATTTTAGTGAAATGCAAGGA
AGGAAGAGAGGAGATGATGAGAGTAAGTGGGTGTGTGGGAGTGTTTGTCA
AAATGTTGAAGACGGGGAGTTCAAGAGCGGTTCAGTGTTCACTTTTTACT
TTGAGTTGTTTGTGTTGTTGTAGTCAGGAAATTTGTGGGGATTCAAGAAA
AGAAGGGGTTTTGGATATTTGTATGGGGTTGTT
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