DR911825

Overview
NameDR911825
Unique NameDR911825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length237
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.132e-25
Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 1 
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKI 328
[Close]
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.132e-25
Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 1 
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:  255 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKI 329
[Close]
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.132e-25
Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 1 
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:  255 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKI 329
[Close]
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK3_POPTR (S-adenosylmethionine synthetase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.132e-25
Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 1 
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:  255 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKI 329
[Close]
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK3_ACTCH (S-adenosylmethionine synthetase 3 (Fragment) OS=Actinidia chinensis GN=SAM3 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.132e-25
Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 1 
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:  221 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKI 295
[Close]
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.132e-25
Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 1 
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKI 328
[Close]
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.132e-25
Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 1 
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKI 328
[Close]
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.132e-25
Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 1 
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKI 328
[Close]
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK1_SOLLC (S-adenosylmethionine synthetase 1 OS=Solanum lycopersicum GN=SAM1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.132e-25
Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 1 
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKI 328
[Close]
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK1_PETCR (S-adenosylmethionine synthetase 1 (Fragment) OS=Petroselinum crispum GN=SMS-1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.132e-25
Identity = 58/75 (77.33%), Postives = 60/75 (80.00%), Query Frame = 1 
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:   97 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKI 171
The following BLAST results are available for this feature:
BLAST of DR911825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SOLBR9.132e-2577.33S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK_POPDE9.132e-2577.33S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK5_POPTR9.132e-2577.33S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK3_POPTR9.132e-2577.33S-adenosylmethionine synthetase 3 OS=Populus trich... [more]
METK3_ACTCH9.132e-2577.33S-adenosylmethionine synthetase 3 (Fragment) OS=Ac... [more]
METK2_POPTR9.132e-2577.33S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK2_CATRO9.132e-2577.33S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK1_SOLTU9.132e-2577.33S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK1_SOLLC9.132e-2577.33S-adenosylmethionine synthetase 1 OS=Solanum lycop... [more]
METK1_PETCR9.132e-2577.33S-adenosylmethionine synthetase 1 (Fragment) OS=Pe... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_19953 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-38_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR911825 ID=DR911825; Name=DR911825; organism=Citrus sinensis; type=EST; length=237bp
CACGAGGGGGGGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGG
TGGCGGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTG
CATATATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCC
CGTCGCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCT
GTCTGTGTTTGTGGACACTTATGGTACAGGAAAGATT
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