EY680429

Overview
NameEY680429
Unique NameEY680429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680429 vs. ExPASy Swiss-Prot
Match: FCSA_DICDI (Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.019e-20
Identity = 61/187 (32.62%), Postives = 102/187 (54.55%), Query Frame = 1
Query:  190 NNQMLGGRKV-SDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANV-SSSQKKEAEKLGVSCFSWEEFLQLGNSGL*TFPGKKRLTFPHKWITM----GTPGKTKG 732
            ++  LG R++ +DGK G Y W++Y++    A   GSA+   G+N GDR GI+  N PEW+++  A  + ++  V LY TLGANA+E+++NH+E+S+   +   +  ILS +P     +KTIVS+  +  ++  K  +   V  +   +F +LG       P +  +  P    T+    G+ G  KG
Sbjct:   67 DSNFLGIRELLADGKRGDYKWISYKQACIRANNIGSALVQLGLNKGDRIGIFSINRPEWVLSDMAAMNHSLVPVALYATLGANAIEYVVNHSEISVLLCEGKNVEKILS-MPGTT--IKTIVSYDPLPQATLDKFKDNENVKLYLLSDFEKLGEQN----PAQHEVPSPEDLCTLLYTSGSTGNPKG 246          
BLAST of EY680429 vs. ExPASy Swiss-Prot
Match: ACSL1_CAVPO (Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.357e-18
Identity = 56/157 (35.67%), Postives = 84/157 (53.50%), Query Frame = 1
Query:  190 NNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRG--VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL--SCLPRCCLYLKTIVSFANVSSSQKKEAEKLGVSCFSWEEFLQLGNS 648
            N   LG RK       PY WL+Y++V D +   GSA+  +G   +P    GI+  N PEW+I  +AC + ++  VPLYDTLGA+A+ +I+N AE+S+ F  + +   IL  S   +    LK IV   +  S   ++ +K GV   S +    LG +
Sbjct:  105 NGPCLGSRKPDQ----PYEWLSYKQVEDLSECIGSALLQKGFQASPDQFIGIFAQNRPEWVIIEQACFAYSMVVVPLYDTLGADAITYIVNKAELSVIFADKPEKARILLESVENKLTPGLKIIVVMDSYGSELVEQGKKCGVEVISLKAMEGLGRA 257          
BLAST of EY680429 vs. ExPASy Swiss-Prot
Match: ACSL1_MOUSE (Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.062e-16
Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = 1
Query:  190 NNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL-----SCLPRCCLYLKTIVSFANVSSSQKKEAEKLGVSCFSWEEFLQLG 642
            N   LG RK +     PY W++Y+EV + A   GS +  +G  P      G++  N PEW+I  + C S ++  VPLYDTLGA+A+ +I+N AE+S+ F  + +   +L     + L  C   LK IV   +  S   +  +K GV   S +    LG
Sbjct:  106 NGPCLGSRKPNQ----PYEWISYKEVAELAECIGSGLIQKGFKPCSEQFIGLFSQNRPEWVIVEQGCFSYSMVVVPLYDTLGADAITYIVNKAELSVIFADKPEKAKLLLEGVENKLTPC---LKIIVIMDSYGSDLVERGKKCGVEIISLKALEDLG 256          
BLAST of EY680429 vs. ExPASy Swiss-Prot
Match: FCSB_DICDI (Fatty acyl-CoA synthetase B OS=Dictyostelium discoideum GN=fcsB PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.617e-15
Identity = 52/194 (26.80%), Postives = 89/194 (45.88%), Query Frame = 1
Query:  172 SAKRIPNNQMLGGRKV-SDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEKLGVSCFSWEEFLQLGNSGL*TFPGKKRLTFPHK------WITMGTPGKTKG 732
            S K+    +  G RK  S+G +G + W++Y    +        +   G+ P  + GI+  N  EW+I   A   Q+   V  Y+TLG  ++ ++  HAE+ +AF     +   L  + +    LKTI+ F ++       A++LGV+ ++++E ++ G        GK + T P          T GT G  KG
Sbjct:   72 SCKKYGERKCFGERKKDSNGNLGKFEWISYNTYLERCEYIQQGLCELGLKPKSKVGIFSKNRLEWLIVHSASFIQSYCVVSFYETLGVESLSYVTEHAEIGLAFCSAETLQKTLD-IAKGVKVLKTIICFDSIDKEHYNIAKELGVTLYTYDEIMKKGKEA----NGKHKHTPPTPDTLSTIMYTSGTTGPPKG 260          
BLAST of EY680429 vs. ExPASy Swiss-Prot
Match: ACSL5_RAT (Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus GN=Acsl5 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.617e-15
Identity = 50/155 (32.26%), Postives = 77/155 (49.68%), Query Frame = 1
Query:  190 NNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL--SCLPRCCLYLKTIVSFANVSSSQKKEAEKLGVSCFSWEEFLQLG 642
            N   LG RK +     PY W++Y++V D A   GS +  +G  P      GI+  N PEW+I+  AC + ++  VPLYDTLGA A+ ++IN A++S+      +  ++L  +        LKT++          K  EK G+   S  +   LG
Sbjct:   90 NGPCLGYRKPNQ----PYKWISYKQVSDRAEYLGSCLLHKGYKPSQDQFIGIFAQNRPEWVISELACYTYSMVAVPLYDTLGAEAIIYVINRADISVVICDTPQKATMLIENVEKDLTPGLKTVILMDPFDDDLMKRGEKCGIEMLSLHDAENLG 240          
BLAST of EY680429 vs. ExPASy Swiss-Prot
Match: ACSL1_HUMAN (Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens GN=ACSL1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.830e-15
Identity = 51/157 (32.48%), Postives = 78/157 (49.68%), Query Frame = 1
Query:  190 NNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN--PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL--SCLPRCCLYLKTIVSFANVSSSQKKEAEKLGVSCFSWEEFLQLGNS 648
            N   LG RK       PY WL+Y++V + +   GSA+  +G    P    GI+  N PEW+I  + C + ++  VPLYDTLG  A+ +I+N AE+S+ FV + +   +L      +    LK IV      S   +  ++ GV   S +    LG +
Sbjct:  105 NGPCLGSRKPDQ----PYEWLSYKQVAELSECIGSALIQKGFKTAPDQFIGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVFVDKPEKAKLLLEGVENKLIPGLKIIVVMDAYGSELVERGQRCGVEVTSMKAMEDLGRA 257          
BLAST of EY680429 vs. ExPASy Swiss-Prot
Match: ACSL1_RAT (Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.215e-14
Identity = 49/154 (31.82%), Postives = 78/154 (50.65%), Query Frame = 1
Query:  202 LGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL-----SCLPRCCLYLKTIVSFANVSSSQKKEAEKLGVSCFSWEEFLQLG 642
            LG RK +     PY W++Y++V + A   GSA+  +G  P      GI+  N PEW+   + C + ++  VPLYDTLG +A+ +I+N AE+S+ F  + +   +L     + L  C   LK IV   +  +   +  +K GV     +    LG
Sbjct:  110 LGSRKPNQ----PYEWISYKQVAEMAECIGSALIQKGFKPCSEQFIGIFSQNRPEWVTIEQGCFTYSMVVVPLYDTLGTDAITYIVNKAELSVIFADKPEKAKLLLEGVENKLTPC---LKIIVIMDSYDNDLVERGQKCGVEIIGLKALEDLG 256          
BLAST of EY680429 vs. ExPASy Swiss-Prot
Match: ACSL5_MOUSE (Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculus GN=Acsl5 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.893e-14
Identity = 56/185 (30.27%), Postives = 81/185 (43.78%), Query Frame = 1
Query:  190 NNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR--CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL--SCLPRCCLYLKTIVSFANVSSSQKKEAEKLGVSCFSWEEFLQLGNSGL*TFPGKKRLTFPHKWITMGTPGKTKG 732
            N   LG RK +     PY W++Y++V D A   GS +  +G         GI+  N PEW+I+  AC + ++  VPLYDTLG  A+ F+IN A++ +      +  ++L  +        LKTI+          K  EK GV   S  +   +G          K         T GT G  KG
Sbjct:   90 NGPCLGYRKPNQ----PYKWISYKQVSDRAEYLGSCLLHKGYKSSQDQFVGIFAQNRPEWVISELACYTYSMVAVPLYDTLGTEAIIFVINRADIPVVICDTPQKATMLVENVEKGLTPGLKTIILMDPFDDDLMKRGEKCGVEMLSLHDAENIGKENFKKPVPPKPEDLSVICFTSGTTGDPKG 270          
BLAST of EY680429 vs. ExPASy Swiss-Prot
Match: ACSL5_HUMAN (Long-chain-fatty-acid--CoA ligase 5 OS=Homo sapiens GN=ACSL5 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.178e-13
Identity = 51/155 (32.90%), Postives = 75/155 (48.39%), Query Frame = 1
Query:  190 NNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGV--NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVS--IAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEKLGVSCFSWEEFLQLG 642
            N   LG RK +     PY WL+Y++V D A   GS +  +G   +P    GI+  N PEWII+  AC + ++  VPLYDTLG  A+  I+N A+++  I    +  +  I +        LK I+         K+  EK G+   S  +   LG
Sbjct:   90 NGPCLGYRKPNQ----PYRWLSYKQVSDRAEYLGSCLLHKGYKSSPDQFVGIFAQNRPEWIISELACYTYSMVAVPLYDTLGPEAIVHIVNKADIAMVICDTPQKALVLIGNVEKGFTPSLKVIILMDPFDDDLKQRGEKSGIEILSLYDAENLG 240          
BLAST of EY680429 vs. ExPASy Swiss-Prot
Match: LCF2_SCHPO (Long-chain-fatty-acid--CoA ligase 2 OS=Schizosaccharomyces pombe GN=SPBP4H10.11c PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.307e-13
Identity = 60/275 (21.82%), Postives = 117/275 (42.55%), Query Frame = 1
Query:   19 MSETYTVKVEEARPAADGKPSGGPVYRCIYAKDGLLESPA-GLESPWQFFCDSAKRIPNNQMLGGRKV-------------------------SDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSS--QKKEAEKLGVSCFSWEEFLQLGNSGL*TFPGKKRLTFPHK---------WITMGTPGKTKG 732
            + + Y V+ ++++     +P    +YR I++   LL++P  G+ + +   C +AK     Q +G RK+                         +  ++GPY ++++ +VY+ A+  GS + + G+        + +   +W    + C+SQAI  V  Y+TLG + +   ++  +    F   N IP +L  L +   ++K IV  +  S    +  ++    V   +++  L L         GK++   PH            T G+ GK KG
Sbjct:    3 IKDYYCVETKDSK-----QPGESYIYRSIHSAGKLLDTPEDGVSTVYDLLCTAAKNHGEKQAMGSRKLIKENREEREIIRKVDNEEVVEKKLWTTYELGPYEYISFNKVYEIALALGSGLVASGITSETTMLFFAATSAKWFTTAQGCSSQAIPIVTAYETLGEDGIYTSLDECKSRAIFTDPNLIPKLLGPLKQ-STWVKLIVCSSTPSEDLVELVKSTAPDVEIITYDNLLSL---------GKEKPQPPHPPKADDICCYMYTSGSTGKPKG 262          
The following BLAST results are available for this feature:
BLAST of EY680429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
FCSA_DICDI6.019e-2032.62Fatty acyl-CoA synthetase A OS=Dictyostelium disco... [more]
ACSL1_CAVPO7.357e-1835.67Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porce... [more]
ACSL1_MOUSE1.062e-1634.18Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculu... [more]
FCSB_DICDI2.617e-1526.80Fatty acyl-CoA synthetase B OS=Dictyostelium disco... [more]
ACSL5_RAT2.617e-1532.26Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norv... [more]
ACSL1_HUMAN5.830e-1532.48Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapien... [more]
ACSL1_RAT2.215e-1431.82Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norv... [more]
ACSL5_MOUSE2.893e-1430.27Long-chain-fatty-acid--CoA ligase 5 OS=Mus musculu... [more]
ACSL5_HUMAN4.178e-1332.90Long-chain-fatty-acid--CoA ligase 5 OS=Homo sapien... [more]
LCF2_SCHPO9.307e-1321.82Long-chain-fatty-acid--CoA ligase 2 OS=Schizosacch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-011-A03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680429 ID=EY680429; Name=EY680429; organism=Citrus sinensis; type=EST; length=834bp
CCACGCGTCCGGGCAACAATGTCTGAGACCTATACTGTCAAAGTTGAAGA
AGCAAGGCCTGCTGCAGATGGCAAGCCGTCGGGCGGCCCGGTTTATCGGT
GCATTTATGCCAAAGATGGGTTACTAGAGTCACCGGCCGGTTTGGAGTCT
CCATGGCAGTTTTTTTGTGATTCTGCCAAAAGGATTCCAAATAACCAAAT
GCTGGGTGGACGCAAAGTCAGTGACGGAAAGGTTGGTCCTTATGTGTGGC
TCACATACCAAGAGGTCTATGATGCTGCGATTCGTTTCGGTTCCGCCATG
AGGAGCCGTGGTGTCAATCCTGGAGATCGTTGCGGTATTTATGGATCTAA
TTGCCCTGAATGGATTATAGCTATGGAGGCTTGTAATAGCCAGGCCATAA
CGTATGTACCACTATATGACACCCTAGGTGCTAATGCGGTGGAGTTCATC
ATCAATCATGCTGAAGTTTCAATAGCTTTTGTTCAGGAGAACAAAATCCC
TTCTATTCTATCTTGCCTTCCGAGGTGTTGTTTGTACTTAAAAACTATTG
TCAGCTTTGCAAATGTTTCTAGCTCACAGAAGAAGGAAGCTGAAAAACTT
GGGGTCTCTTGCTTTTCTTGGGAGGAATTTCTACAGTTGGGGAACTCTGG
ATTGTGAACTTTCCCTGGAAAAAAAAGACTGACATTTCCACATAAATGGA
TAACAATGGGAACACCAGGAAAAACTAAAGGGGGGCGTTTTCCCCAAATC
CGGGCTGTTGGAACAAAAATTACTGGATTGTCCAACCAAATTGTTTGGGG
GTTACGGGGCAAATGGTGGTTCCAAAAAAAGAAA
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