DR911758

Overview
NameDR911758
Unique NameDR911758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length247
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR911758 vs. ExPASy Swiss-Prot
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.210e-14
Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = 1
Query:   25 KSDLQRLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 246
            K D +R++ VN +G FLG KHAARVM P ++G I+ TAS  + ++G  S AYT SK+ ++G  +  A ELG++G
Sbjct:  115 KEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHG 188          
BLAST of DR911758 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.310e-12
Identity = 36/80 (45.00%), Postives = 48/80 (60.00%), Query Frame = 1
Query:    7 SILDTPKSDLQRLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 246
            SIL    ++  R++ VN +G  LG KHAAR M P++ G I+  AS    + GLG  AYT SK+ I+GL K  A EL  +G
Sbjct:  150 SILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHG 229          
BLAST of DR911758 vs. ExPASy Swiss-Prot
Match: ABA2_ARATH (Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.146e-12
Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 1
Query:   28 SDLQRLINVNTIGGFLGAKHAARVMVPQQKGCILFTASACTEIAGLGSPAYTISKYGILGLVKCLAAELGQYG 246
            S+ +   +VN  G FL  KHAARVM+P++KG I+   S    + G+G  +Y  SK+ +LGL + +AAELGQ+G
Sbjct:  123 SEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHG 195          
The following BLAST results are available for this feature:
BLAST of DR911758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MOMAS_ORYSJ4.210e-1447.30Momilactone A synthase OS=Oryza sativa subsp. japo... [more]
TS2_MAIZE2.310e-1245.00Sex determination protein tasselseed-2 OS=Zea mays... [more]
ABA2_ARATH5.146e-1245.21Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_19886 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-15_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR911758 ID=DR911758; Name=DR911758; organism=Citrus sinensis; type=EST; length=247bp
TTTGGGAGCATTTTGGACACTCCAAAGTCTGATCTACAACGCTTAATTAA
TGTAAACACTATAGGTGGTTTCTTAGGAGCCAAGCATGCTGCAAGAGTCA
TGGTGCCACAGCAAAAAGGTTGCATACTGTTTACAGCTAGTGCTTGTACA
GAAATTGCAGGGCTTGGCTCCCCTGCTTATACAATATCCAAATATGGGAT
TTTAGGACTAGTAAAGTGCTTGGCAGCAGAGCTTGGACAGTATGGAA
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