DR911682

Overview
NameDR911682
Unique NameDR911682
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length260
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR911682 vs. ExPASy Swiss-Prot
Match: UGPA_PYRPY (UTP--glucose-1-phosphate uridylyltransferase OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.054e-36
Identity = 74/86 (86.05%), Postives = 80/86 (93.02%), Query Frame = 2
Query:    2 VHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITL 259
            V RSRFLPVKATSDLLLVQSDLYTL DGFVTRN ARKNP NPTIELGPEFKKVG++LSRFKSIPSI+EL+SLKV+GDVWFGA + L
Sbjct:  353 VPRSRFLPVKATSDLLLVQSDLYTLQDGFVTRNSARKNPENPTIELGPEFKKVGSYLSRFKSIPSILELESLKVSGDVWFGAGVVL 438          
BLAST of DR911682 vs. ExPASy Swiss-Prot
Match: UGPA1_ARATH (UTP--glucose-1-phosphate uridylyltransferase 1 OS=Arabidopsis thaliana GN=At5g17310 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.166e-35
Identity = 72/86 (83.72%), Postives = 78/86 (90.70%), Query Frame = 2
Query:    2 VHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITL 259
            V RSRFLPVKATSDLLLVQSDLYTL DGFVTRN+AR NP NP IELGPEFKKV +FLSRFKSIPSI+ELDSLKV+GDVWFG+ + L
Sbjct:  352 VPRSRFLPVKATSDLLLVQSDLYTLVDGFVTRNKARTNPTNPAIELGPEFKKVASFLSRFKSIPSIVELDSLKVSGDVWFGSGVVL 437          
BLAST of DR911682 vs. ExPASy Swiss-Prot
Match: UGPA2_ARATH (Probable UTP--glucose-1-phosphate uridylyltransferase 2 OS=Arabidopsis thaliana GN=At3g03250 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.523e-35
Identity = 72/86 (83.72%), Postives = 80/86 (93.02%), Query Frame = 2
Query:    2 VHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITL 259
            V RSRFLPVKA+SDLLLVQSDLYTL DGFVTRN+AR NP+NP+IELGPEFKKV  FLSRFKSIPSI+ELDSLKV+GDVWFG++I L
Sbjct:  351 VPRSRFLPVKASSDLLLVQSDLYTLVDGFVTRNKARTNPSNPSIELGPEFKKVATFLSRFKSIPSIVELDSLKVSGDVWFGSSIVL 436          
BLAST of DR911682 vs. ExPASy Swiss-Prot
Match: UGPA_MUSAC (UTP--glucose-1-phosphate uridylyltransferase OS=Musa acuminata GN=UGPA PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 7.557e-35
Identity = 71/86 (82.56%), Postives = 77/86 (89.53%), Query Frame = 2
Query:    2 VHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITL 259
            V RSRFLPVKATSDLLLVQSDLY L DGFV RN+AR NP+NP+IELGPEFKKV NFLSRFKSIPSI+ELDSLKV+GDVWFG  + L
Sbjct:  349 VPRSRFLPVKATSDLLLVQSDLYMLVDGFVIRNKARTNPSNPSIELGPEFKKVANFLSRFKSIPSIVELDSLKVSGDVWFGEGVVL 434          
BLAST of DR911682 vs. ExPASy Swiss-Prot
Match: UGPA_SOLTU (UTP--glucose-1-phosphate uridylyltransferase OS=Solanum tuberosum PE=1 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 2.872e-34
Identity = 72/87 (82.76%), Postives = 78/87 (89.66%), Query Frame = 2
Query:    2 VHRSRFLPVKATSDLLLVQSDLYTLAD-GFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITL 259
            V RSRFLPVKATSDLLLVQSDLYTL D G+V RN AR NP+NP+IELGPEFKKV NFL RFKSIPSII+LDSLKVTGDVWFG+ +TL
Sbjct:  358 VPRSRFLPVKATSDLLLVQSDLYTLTDEGYVIRNPARSNPSNPSIELGPEFKKVANFLGRFKSIPSIIDLDSLKVTGDVWFGSGVTL 444          
BLAST of DR911682 vs. ExPASy Swiss-Prot
Match: UGPA_ASTPN (UTP--glucose-1-phosphate uridylyltransferase OS=Astragalus penduliflorus GN=UGP PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.238e-33
Identity = 68/86 (79.07%), Postives = 74/86 (86.05%), Query Frame = 2
Query:    2 VHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITL 259
            V RSRFLPVKATSDLLLVQSDLYT+ +G V RN+AR NP NP+IELGPEFKKV NFL RFKSIPSI+ELDSLKV GDVWFG  + L
Sbjct:  353 VPRSRFLPVKATSDLLLVQSDLYTVENGSVIRNKARTNPENPSIELGPEFKKVSNFLGRFKSIPSIVELDSLKVVGDVWFGTGVIL 438          
BLAST of DR911682 vs. ExPASy Swiss-Prot
Match: UGPA_HORVU (UTP--glucose-1-phosphate uridylyltransferase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.058e-32
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 2
Query:    2 VHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITL 259
            V RSRFLPVKATSDLLLVQSDLYTL DG+V RN AR  P+NP+IELGPEFKKV NFL+RFKSIPSI+ELDSLKV+GDV FG+ + L
Sbjct:  355 VPRSRFLPVKATSDLLLVQSDLYTLVDGYVIRNPARVKPSNPSIELGPEFKKVANFLARFKSIPSIVELDSLKVSGDVSFGSGVVL 440          
BLAST of DR911682 vs. ExPASy Swiss-Prot
Match: UGPA_PIG (UTP--glucose-1-phosphate uridylyltransferase OS=Sus scrofa GN=UGP2 PE=2 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 3.082e-20
Identity = 49/86 (56.98%), Postives = 64/86 (74.42%), Query Frame = 2
Query:    2 VHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITL 259
            V RSRFLPVK TSDLLLV S+LY+L  G +T +E R+ P  P ++LG  F KV ++L RF+SIP ++ELD L V+GDV FG N++L
Sbjct:  387 VPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSL 472          
BLAST of DR911682 vs. ExPASy Swiss-Prot
Match: UGPA_MOUSE (UTP--glucose-1-phosphate uridylyltransferase OS=Mus musculus GN=Ugp2 PE=2 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 3.082e-20
Identity = 49/86 (56.98%), Postives = 64/86 (74.42%), Query Frame = 2
Query:    2 VHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITL 259
            V RSRFLPVK TSDLLLV S+LY+L  G +T +E R+ P  P ++LG  F KV ++L RF+SIP ++ELD L V+GDV FG N++L
Sbjct:  387 VPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSL 472          
BLAST of DR911682 vs. ExPASy Swiss-Prot
Match: UGPA_HUMAN (UTP--glucose-1-phosphate uridylyltransferase OS=Homo sapiens GN=UGP2 PE=1 SV=5)

HSP 1 Score: 97.0561 bits (240), Expect = 3.082e-20
Identity = 49/86 (56.98%), Postives = 64/86 (74.42%), Query Frame = 2
Query:    2 VHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITL 259
            V RSRFLPVK TSDLLLV S+LY+L  G +T +E R+ P  P ++LG  F KV ++L RF+SIP ++ELD L V+GDV FG N++L
Sbjct:  387 VPRSRFLPVKTTSDLLLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSL 472          
The following BLAST results are available for this feature:
BLAST of DR911682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
UGPA_PYRPY1.054e-3686.05UTP--glucose-1-phosphate uridylyltransferase OS=Py... [more]
UGPA1_ARATH1.166e-3583.72UTP--glucose-1-phosphate uridylyltransferase 1 OS=... [more]
UGPA2_ARATH1.523e-3583.72Probable UTP--glucose-1-phosphate uridylyltransfer... [more]
UGPA_MUSAC7.557e-3582.56UTP--glucose-1-phosphate uridylyltransferase OS=Mu... [more]
UGPA_SOLTU2.872e-3482.76UTP--glucose-1-phosphate uridylyltransferase OS=So... [more]
UGPA_ASTPN9.238e-3379.07UTP--glucose-1-phosphate uridylyltransferase OS=As... [more]
UGPA_HORVU2.058e-3279.07UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]
UGPA_PIG3.082e-2056.98UTP--glucose-1-phosphate uridylyltransferase OS=Su... [more]
UGPA_MOUSE3.082e-2056.98UTP--glucose-1-phosphate uridylyltransferase OS=Mu... [more]
UGPA_HUMAN3.082e-2056.98UTP--glucose-1-phosphate uridylyltransferase OS=Ho... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_19810 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-07_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR911682 ID=DR911682; Name=DR911682; organism=Citrus sinensis; type=EST; length=260bp
CGTACATCGATCTCGATTCCTTCCGGTGAAGGCAACTTCTGATCTGCTTC
TTGTCCAGTCTGATCTTTACACCTTGGCCGATGGATTTGTTACTCGGAAT
GAAGCTAGAAAAAACCCTGCAAATCCAACTATTGAACTGGGACCTGAATT
TAAGAAGGTTGGCAACTTTTTGAGCCGATTCAAGTCTATTCCTAGTATCA
TCGAGCTTGATAGCCTTAAGGTGACCGGTGACGTATGGTTTGGTGCTAAT
ATTACCCTCA
back to top