DR911665

Overview
NameDR911665
Unique NameDR911665
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length263
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR911665 vs. ExPASy Swiss-Prot
Match: BH013_ARATH (Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.637e-23
Identity = 53/58 (91.38%), Postives = 56/58 (96.55%), Query Frame = 3
Query:    3 VEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENL 176
            VEAERQRREKLNQRFYALR+VVPNISKMDKASLLGDA++YINEL AKLKVMEAERE L
Sbjct:  435 VEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERL 492          
BLAST of DR911665 vs. ExPASy Swiss-Prot
Match: AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.629e-21
Identity = 57/87 (65.52%), Postives = 63/87 (72.41%), Query Frame = 3
Query:    3 VEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGKLQRLVCL*VES*CGKSEPEPPDVDIQ 263
            VEAERQRREKLNQRFYALR+VVPNISKMDKASLLGDAI+YI ELQ K+K+ME ER      L     + VE        E P+VDIQ
Sbjct:  397 VEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKSLSESNTITVE--------ESPEVDIQ 475          
BLAST of DR911665 vs. ExPASy Swiss-Prot
Match: ATR2_ARATH (Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.072e-20
Identity = 47/62 (75.81%), Postives = 57/62 (91.94%), Query Frame = 3
Query:    3 VEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGKL 188
            VEAERQRREKLNQRFY+LRAVVPN+SKMDKASLLGDAI+YINEL++KL+  E+++E +  KL
Sbjct:  417 VEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKL 478          
BLAST of DR911665 vs. ExPASy Swiss-Prot
Match: RAP1_ARATH (Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 8.938e-20
Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 3
Query:    3 VEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGKLQRL 197
            VEAERQRREKLNQRFYALRAVVPN+SKMDKASLLGDAIAYINEL++K+   E+E+  +  +L+ +
Sbjct:  454 VEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQLEEV 518          
BLAST of DR911665 vs. ExPASy Swiss-Prot
Match: BH004_ARATH (Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.396e-19
Identity = 45/62 (72.58%), Postives = 57/62 (91.94%), Query Frame = 3
Query:    3 VEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGKL 188
            VEAERQRREKLNQRFY+LRAVVPN+SKMDKASLLGDAI+YI+EL++KL+  E+++E L  ++
Sbjct:  418 VEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQI 479          
BLAST of DR911665 vs. ExPASy Swiss-Prot
Match: BH003_ARATH (Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.875e-18
Identity = 44/56 (78.57%), Postives = 50/56 (89.29%), Query Frame = 3
Query:    3 VEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERE 170
            VEAERQRREKLNQRFYALRAVVPNISKMDKASLL DAI YI ++Q K++V E E++
Sbjct:  322 VEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQ 377          
BLAST of DR911665 vs. ExPASy Swiss-Prot
Match: BH028_ARATH (Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.995e-16
Identity = 41/65 (63.08%), Postives = 50/65 (76.92%), Query Frame = 3
Query:    3 VEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGKLQRL 197
            VEAER RREKLN RFYALRAVVPN+SKMDK SLL DA+ YINEL++K + +E E+  +  +   L
Sbjct:  345 VEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIEIQFNEL 409          
BLAST of DR911665 vs. ExPASy Swiss-Prot
Match: BH014_ARATH (Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.477e-14
Identity = 36/54 (66.67%), Postives = 46/54 (85.19%), Query Frame = 3
Query:    3 VEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAE 164
            VEAE+QRREKLN RFYALRA+VP +S+MDKASLL DA++YI  L++K+  +E E
Sbjct:  251 VEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETE 304          
BLAST of DR911665 vs. ExPASy Swiss-Prot
Match: BH035_ARATH (Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.358e-12
Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = 3
Query:    3 VEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENL 176
            + +ER RR+KLNQR +ALR+VVPNI+KMDKAS++ DAI+YI  LQ + K +EAE   L
Sbjct:   57 IVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIREL 114          
BLAST of DR911665 vs. ExPASy Swiss-Prot
Match: AMS_ARATH (Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana GN=AMS PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.959e-12
Identity = 33/57 (57.89%), Postives = 45/57 (78.95%), Query Frame = 3
Query:    9 AERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS 179
            AER+RR+KLN R YALR++VP I+K+D+AS+LGDAI Y+ ELQ + K ++ E E  S
Sbjct:  318 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENS 374          
The following BLAST results are available for this feature:
BLAST of DR911665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
BH013_ARATH8.637e-2391.38Transcription factor bHLH13 OS=Arabidopsis thalian... [more]
AIB_ARATH1.629e-2165.52Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Ar... [more]
ATR2_ARATH3.072e-2075.81Transcription factor ATR2 OS=Arabidopsis thaliana ... [more]
RAP1_ARATH8.938e-2072.31Transcription factor MYC2 OS=Arabidopsis thaliana ... [more]
BH004_ARATH3.396e-1972.58Transcription factor MYC4 OS=Arabidopsis thaliana ... [more]
BH003_ARATH2.875e-1878.57Transcription factor bHLH3 OS=Arabidopsis thaliana... [more]
BH028_ARATH5.995e-1663.08Transcription factor bHLH28 OS=Arabidopsis thalian... [more]
BH014_ARATH1.477e-1466.67Transcription factor bHLH14 OS=Arabidopsis thalian... [more]
BH035_ARATH2.358e-1260.34Transcription factor bHLH35 OS=Arabidopsis thalian... [more]
AMS_ARATH8.959e-1257.89Transcription factor ABORTED MICROSPORES OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_19793 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-01_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR911665 ID=DR911665; Name=DR911665; organism=Citrus sinensis; type=EST; length=263bp
ACGTGGAGGCGGAGAGGCAACGGCGTGAGAAGCTAAACCAACGGTTCTAT
GCATTACGAGCTGTGGTACCTAACATATCCAAGATGGATAAAGCATCGTT
GCTGGGAGATGCCATTGCTTACATCAATGAGCTTCAAGCAAAGCTAAAGG
TCATGGAAGCAGAGAGGGAGAACCTAAGTGGCAAACTCCAGAGACTTGTC
TGCCTTTGAGTCGAATCCTAATGTGGAAAGTCAGAACCCGAGCCCCCTGA
TGTTGATATTCAA
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