DR911662

Overview
NameDR911662
Unique NameDR911662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length264
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR911662 vs. ExPASy Swiss-Prot
Match: E13L3_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 3 OS=Arabidopsis thaliana GN=At5g08000 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.746e-26
Identity = 47/69 (68.12%), Postives = 57/69 (82.61%), Query Frame = 2
Query:   56 HSTANWCVCKDGVGDPVLQKALDYACGAGADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQRKGQAQGSC 262
            H++A+WCVCK G+ D VLQK LDYACG GADCNP H  G C+NP+ V+AHC+YAVNS+FQ+KGQA  SC
Sbjct:   16 HTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVRAHCNYAVNSFFQKKGQASESC 84          
BLAST of DR911662 vs. ExPASy Swiss-Prot
Match: E13L2_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 2 OS=Arabidopsis thaliana GN=At5g61130 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.981e-24
Identity = 44/69 (63.77%), Postives = 55/69 (79.71%), Query Frame = 2
Query:   56 HSTANWCVCKDGVGDPVLQKALDYACGAGADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQRKGQAQGSC 262
            HS+A+WCVCK G+ D VLQ  LDYACG GADCNP      C+NP+ V++HC+YAVNS+FQ+KGQ+ GSC
Sbjct:   16 HSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVRSHCNYAVNSFFQKKGQSPGSC 84          
BLAST of DR911662 vs. ExPASy Swiss-Prot
Match: E13L4_ARATH (Glucan endo-1,3-beta-glucosidase-like protein At1g69295 OS=Arabidopsis thaliana GN=At1g69295 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.875e-18
Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 2
Query:   56 HSTANWCVCKDGVGDPVLQKALDYACGAGADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQRKGQAQGSC 262
            +S A +C+CK+G  + VLQKA+DYACG GADC  I   G CY PNTVK HC  AVNSY+Q+K  +  +C
Sbjct:   16 YSNAAYCLCKEG-NEQVLQKAIDYACGNGADCTQIQPTGACYQPNTVKNHCDVAVNSYYQKKASSGATC 83          
BLAST of DR911662 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.611e-14
Identity = 33/65 (50.77%), Postives = 44/65 (67.69%), Query Frame = 2
Query:   71 WCVCKDGVGDPVLQKALDYACGAG-ADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQRKGQAQGSC 262
            +C+  DGV    LQ ALD+ACG G ++C+ I     CY PN VK H S+A NSY+Q++G+A GSC
Sbjct:  272 YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSC 336          
BLAST of DR911662 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.637e-13
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 2
Query:   71 WCVCKDGVGDPVLQKALDYACGAGADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQRKGQAQGSC 262
            WCV KDG     LQ  ++YACG   DC PI S G C++PN+++AH SY +N+Y+Q  G    +C
Sbjct:  377 WCVAKDGANGTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLAC 439          
BLAST of DR911662 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.805e-12
Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 2
Query:   59 STANWCVCKDGVGDPVLQKALDYACGAGADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQRKGQAQGSC 262
            +++ WCV K G  +  LQ +LD+ACG G DC  I   G C+ PN V +H +YA+N YFQ+  +    C
Sbjct:  360 TSSGWCVPKKGATNEELQASLDWACGHGIDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQPTDC 427          
BLAST of DR911662 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.959e-12
Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 2
Query:   71 WCVCKDGVGDPVLQKALDYACGAG-ADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQRKGQAQGSC 262
            +C+ K+ V   +LQ ALD+ACG G  DC+ +     CY P+ V AH +YA N+Y+Q+ G+A GSC
Sbjct:  360 FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSC 424          
BLAST of DR911662 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.404e-11
Identity = 28/68 (41.18%), Postives = 40/68 (58.82%), Query Frame = 2
Query:   62 TANWCVCKDGVGDPVLQKALDYACGAG-ADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQRKGQAQGSC 262
            T  WC+         LQ ALD+ACG G  DC+ +  + PC+ P+TV +H SYA N+Y+Q+ G +   C
Sbjct:  388 TKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDC 455          
BLAST of DR911662 vs. ExPASy Swiss-Prot
Match: E13L1_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 1 OS=Arabidopsis thaliana GN=At3g58100 PE=1 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.584e-11
Identity = 27/65 (41.54%), Postives = 39/65 (60.00%), Query Frame = 2
Query:   71 WCVCKDGVGDPVLQKALDYACG-AGADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQRKGQAQGSC 262
            WCV K+   D  LQ A+++ACG  GADC PI   GPC +P  V+   S+  N+Y+ + G+   +C
Sbjct:   41 WCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEAC 105          
The following BLAST results are available for this feature:
BLAST of DR911662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
E13L3_ARATH3.746e-2668.12Glucan endo-1,3-beta-glucosidase-like protein 3 OS... [more]
E13L2_ARATH5.981e-2463.77Glucan endo-1,3-beta-glucosidase-like protein 2 OS... [more]
E13L4_ARATH2.875e-1856.52Glucan endo-1,3-beta-glucosidase-like protein At1g... [more]
E131_ARATH5.611e-1450.77Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E13B_WHEAT3.637e-1346.88Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E137_ARATH1.805e-1242.65Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E133_ARATH8.959e-1246.15Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E1312_ARATH3.404e-1141.18Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E13L1_ARATH7.584e-1141.54Glucan endo-1,3-beta-glucosidase-like protein 1 OS... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_19790 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-17_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR911662 ID=DR911662; Name=DR911662; organism=Citrus sinensis; type=EST; length=264bp
TCATTCAGTGATGGCTGTTTTGGTGCTTTTAGCTCTCTTCCTTGGCTTCA
CTGGGCATTCAACTGCAAACTGGTGTGTTTGCAAAGATGGAGTGGGTGAC
CCAGTTTTACAAAAAGCTTTGGACTATGCTTGTGGAGCTGGGGCTGATTG
TAACCCTATCCATTCCAATGGGCCTTGTTACAACCCCAACACTGTCAAAG
CTCACTGCAGTTATGCTGTCAACAGCTATTTCCAGAGAAAGGGTCAAGCT
CAAGGCTCTTGTGA
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