DR911661
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR911661 vs. ExPASy Swiss-Prot
Match: RK22_PLAOC (50S ribosomal protein L22, chloroplastic OS=Platanus occidentalis GN=rpl22 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.127e-21 Identity = 54/72 (75.00%), Postives = 57/72 (79.17%), Query Frame = 2 Query: 2 LVYSAAANGIHNLGFNEGSLFIIKAE*PMGPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYRDYL 217 LVYSAAAN HN+GFNE L I KAE GPT KRLKPRARGRSY IK+PTCHITIVLKDISL E EY +L Sbjct: 60 LVYSAAANASHNMGFNEADLIISKAEVNEGPTMKRLKPRARGRSYPIKRPTCHITIVLKDISLDE-EYLIWL 130
BLAST of DR911661 vs. ExPASy Swiss-Prot
Match: RK22_POPAL (50S ribosomal protein L22, chloroplastic OS=Populus alba GN=rpl22 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.012e-20 Identity = 50/72 (69.44%), Postives = 56/72 (77.78%), Query Frame = 2 Query: 2 LVYSAAANGIHNLGFNEGSLFIIKAE*PMGPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYRDYL 217 LVYSAAAN HN+G NE SL I KAE G T K+ KPRARGRSYLIK+PTCHI+IVL+DIS EYE D+L Sbjct: 59 LVYSAAANASHNMGLNEASLVISKAEVNEGATMKKFKPRARGRSYLIKRPTCHISIVLEDISYEEYE-EDFL 129
BLAST of DR911661 vs. ExPASy Swiss-Prot
Match: RK22_EUCGG (50S ribosomal protein L22, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rpl22 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.525e-19 Identity = 53/87 (60.92%), Postives = 58/87 (66.67%), Query Frame = 2 Query: 2 LVYSAAANGIHNLGFNEGSLFIIKAE*PMGPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYRDYLDLECSKNTRLINKKK 262 LVYSAAAN HN+GFNE SL I KAE G T K+LKPRARGRSY IK+PTCHI IVLKD S E E + C K + KKK Sbjct: 60 LVYSAAANASHNMGFNEASLVISKAEVNEGTTMKKLKPRARGRSYAIKRPTCHIRIVLKDKSFYEEE-----NFFCLKQSEWKKKKK 141
BLAST of DR911661 vs. ExPASy Swiss-Prot
Match: RK22_DAUCA (50S ribosomal protein L22, chloroplastic OS=Daucus carota GN=rpl22 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.991e-19 Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 2 LVYSAAANGIHNLGFNEGSLFIIKAE*PMGPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYR--DYLD-LECSKNTRLINKKK 262 LVYSAAAN +N+ NE +L I KAE G K+LKPRARGRS+ IK+PTCHI IV+KDISL EY+Y D++D CSK +L +KKK Sbjct: 59 LVYSAAANANYNMDSNESNLVISKAEVSEGTATKKLKPRARGRSFTIKRPTCHIAIVVKDISLDEYQYLGVDFIDSFRCSK--KLQSKKK 146
BLAST of DR911661 vs. ExPASy Swiss-Prot
Match: RK22_POPTR (50S ribosomal protein L22, chloroplastic OS=Populus trichocarpa GN=rpl22 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.396e-19 Identity = 49/72 (68.06%), Postives = 55/72 (76.39%), Query Frame = 2 Query: 2 LVYSAAANGIHNLGFNEGSLFIIKAE*PMGPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYRDYL 217 LVYSAAAN HN+G NE SL I KAE G T K+ KPRARGRSYLIK+ TCHI+IVL+DIS EYE D+L Sbjct: 59 LVYSAAANASHNMGLNEASLVISKAEVNEGATMKKFKPRARGRSYLIKRQTCHISIVLEDISYEEYE-EDFL 129
BLAST of DR911661 vs. ExPASy Swiss-Prot
Match: RK22_PELHO (50S ribosomal protein L22, chloroplastic OS=Pelargonium hortorum GN=rpl22-A PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 5.793e-19 Identity = 47/72 (65.28%), Postives = 58/72 (80.56%), Query Frame = 2 Query: 2 LVYSAAANGIHNLGFNEGSLFIIKAE*PMGPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYRDYL 217 L+ SAAANGIHN+ F+E SL I KAE GPTAK+ KPRA+G+SY IK+ TCHITIVL+DISL E +Y +Y+ Sbjct: 60 LISSAAANGIHNMNFDETSLIISKAEVNEGPTAKKFKPRAKGQSYPIKRSTCHITIVLRDISLNE-KYEEYI 130
BLAST of DR911661 vs. ExPASy Swiss-Prot
Match: RK22_BUXMI (50S ribosomal protein L22, chloroplastic OS=Buxus microphylla GN=rpl22 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.793e-19 Identity = 52/87 (59.77%), Postives = 59/87 (67.82%), Query Frame = 2 Query: 2 LVYSAAANGIHNLGFNEGSLFIIKAE*PMGPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAE----------YEYRD-YLDLEC 229 LVYSAAAN HN+GFNE I KAE G + K+LKPRARGRSYLIK+PTCHITIVLKDI L E + YR+ Y D+ C Sbjct: 57 LVYSAAANASHNMGFNEADSVISKAEVNDGTSVKKLKPRARGRSYLIKRPTCHITIVLKDIYLDEKYIIWLRKYGWIYRNKYTDMTC 143
BLAST of DR911661 vs. ExPASy Swiss-Prot
Match: RK22_AETGR (50S ribosomal protein L22, chloroplastic OS=Aethionema grandiflora GN=rpl22 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.882e-19 Identity = 48/72 (66.67%), Postives = 55/72 (76.39%), Query Frame = 2 Query: 2 LVYSAAANGIHNLGFNEGSLFIIKAE*PMGPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYRDYL 217 LVYSAAAN HN GF E +L I KAE G T K+LKPRARGRSY IK+PTCHITIVL+DIS + +Y +YL Sbjct: 60 LVYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRPTCHITIVLEDISFYQ-QYEEYL 130
BLAST of DR911661 vs. ExPASy Swiss-Prot
Match: RK22_PANGI (50S ribosomal protein L22, chloroplastic OS=Panax ginseng GN=rpl22 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.686e-18 Identity = 53/88 (60.23%), Postives = 64/88 (72.73%), Query Frame = 2 Query: 2 LVYSAAANGIHNLGFNEGSLFIIKAE*PMGPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYRDYLD-LECSKNTRLINKKK 262 LVYSAAAN +N+ NE +L I KAE G K+LKPRARGRS+ IK+PTCHI+IV+KDISL EY D+LD L SK +L +KKK Sbjct: 56 LVYSAAANASYNMDSNESNLVISKAEVSEGTIVKKLKPRARGRSFPIKRPTCHISIVVKDISLDEYIEVDFLDPLRWSK--KLKSKKK 141
BLAST of DR911661 vs. ExPASy Swiss-Prot
Match: RK22_FAGEA (50S ribosomal protein L22, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale GN=rpl22 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.686e-18 Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 2 Query: 2 LVYSAAANGIHNLGFNEGSLFIIKAE*PMGPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAE 196 ++YSAAAN HN GF + L + KAE GPT K+LKPRARGRSYLIKKPTCHI++VLKDIS E Sbjct: 58 IIYSAAANAKHNKGFEKEDLLVWKAEVNKGPTRKKLKPRARGRSYLIKKPTCHISVVLKDISYYE 122 The following BLAST results are available for this feature:
BLAST of DR911661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >DR911661 ID=DR911661; Name=DR911661; organism=Citrus sinensis; type=EST; length=264bpback to top |