DR911650
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR911650 vs. ExPASy Swiss-Prot
Match: RK22_POPAL (50S ribosomal protein L22, chloroplastic OS=Populus alba GN=rpl22 PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 7.437e-17 Identity = 31/43 (72.09%), Postives = 36/43 (83.72%), Query Frame = 1 Query: 91 GPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYRDYL 219 G T K+ KPRARGRSYLIK+PTCHI+IVL+DIS EYE D+L Sbjct: 88 GATMKKFKPRARGRSYLIKRPTCHISIVLEDISYEEYE-EDFL 129 HSP 2 Score: 41.5874 bits (96), Expect = 7.437e-17 Identity = 20/27 (74.07%), Postives = 21/27 (77.78%), Query Frame = 2 Query: 2 KLVYSAAANGIHNLGFNEGSLFIIKAE 82 KLVYSAAAN HN+G NE SL I KAE Sbjct: 58 KLVYSAAANASHNMGLNEASLVISKAE 84
BLAST of DR911650 vs. ExPASy Swiss-Prot
Match: RK22_DAUCA (50S ribosomal protein L22, chloroplastic OS=Daucus carota GN=rpl22 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.111e-16 Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 76 SRIAMGPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYR--DYLD-LECSKNTRLINKKK 264 + ++ G K+LKPRARGRS+ IK+PTCHI IV+KDISL EY+Y D++D CSK +L +KKK Sbjct: 83 AEVSEGTATKKLKPRARGRSFTIKRPTCHIAIVVKDISLDEYQYLGVDFIDSFRCSK--KLQSKKK 146 HSP 2 Score: 34.2686 bits (77), Expect = 2.111e-16 Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = 2 Query: 2 KLVYSAAANGIHNLGFNEGSLFIIKAE 82 KLVYSAAAN +N+ NE +L I KAE Sbjct: 58 KLVYSAAANANYNMDSNESNLVISKAE 84
BLAST of DR911650 vs. ExPASy Swiss-Prot
Match: RK22_POPTR (50S ribosomal protein L22, chloroplastic OS=Populus trichocarpa GN=rpl22 PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 6.066e-16 Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 1 Query: 91 GPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYRDYL 219 G T K+ KPRARGRSYLIK+ TCHI+IVL+DIS EYE D+L Sbjct: 88 GATMKKFKPRARGRSYLIKRQTCHISIVLEDISYEEYE-EDFL 129 HSP 2 Score: 41.5874 bits (96), Expect = 6.066e-16 Identity = 20/27 (74.07%), Postives = 21/27 (77.78%), Query Frame = 2 Query: 2 KLVYSAAANGIHNLGFNEGSLFIIKAE 82 KLVYSAAAN HN+G NE SL I KAE Sbjct: 58 KLVYSAAANASHNMGLNEASLVISKAE 84
BLAST of DR911650 vs. ExPASy Swiss-Prot
Match: RK22_PELHO (50S ribosomal protein L22, chloroplastic OS=Pelargonium hortorum GN=rpl22-A PE=3 SV=2) HSP 1 Score: 62.3882 bits (150), Expect = 1.021e-15 Identity = 29/43 (67.44%), Postives = 37/43 (86.05%), Query Frame = 1 Query: 91 GPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYRDYL 219 GPTAK+ KPRA+G+SY IK+ TCHITIVL+DISL E +Y +Y+ Sbjct: 89 GPTAKKFKPRAKGQSYPIKRSTCHITIVLRDISLNE-KYEEYI 130 HSP 2 Score: 40.0466 bits (92), Expect = 1.021e-15 Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = 2 Query: 2 KLVYSAAANGIHNLGFNEGSLFIIKAE 82 KL+ SAAANGIHN+ F+E SL I KAE Sbjct: 59 KLISSAAANGIHNMNFDETSLIISKAE 85
BLAST of DR911650 vs. ExPASy Swiss-Prot
Match: RK22_PANGI (50S ribosomal protein L22, chloroplastic OS=Panax ginseng GN=rpl22 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 1.722e-15 Identity = 37/64 (57.81%), Postives = 48/64 (75.00%), Query Frame = 1 Query: 76 SRIAMGPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYRDYLD-LECSKNTRLINKKK 264 + ++ G K+LKPRARGRS+ IK+PTCHI+IV+KDISL EY D+LD L SK +L +KKK Sbjct: 80 AEVSEGTIVKKLKPRARGRSFPIKRPTCHISIVVKDISLDEYIEVDFLDPLRWSK--KLKSKKK 141 HSP 2 Score: 34.6538 bits (78), Expect = 1.722e-15 Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = 2 Query: 2 KLVYSAAANGIHNLGFNEGSLFIIKAE 82 KLVYSAAAN +N+ NE +L I KAE Sbjct: 55 KLVYSAAANASYNMDSNESNLVISKAE 81
BLAST of DR911650 vs. ExPASy Swiss-Prot
Match: RK22_MORIN (50S ribosomal protein L22, chloroplastic OS=Morus indica GN=rpl22 PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 4.930e-15 Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = 1 Query: 91 GPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYRDYLDLE 228 G T K+LKPRARGR Y IK+PTCHITIVLKD+ + E EY D E Sbjct: 89 GNTVKKLKPRARGRGYPIKRPTCHITIVLKDLDVEE-EYLDSFAFE 133 HSP 2 Score: 39.6614 bits (91), Expect = 4.930e-15 Identity = 19/27 (70.37%), Postives = 21/27 (77.78%), Query Frame = 2 Query: 2 KLVYSAAANGIHNLGFNEGSLFIIKAE 82 KLVYSAAAN HN+ FNE +L I KAE Sbjct: 59 KLVYSAAANANHNMRFNEANLIISKAE 85
BLAST of DR911650 vs. ExPASy Swiss-Prot
Match: RK22_HELAN (50S ribosomal protein L22, chloroplastic OS=Helianthus annuus GN=rpl22 PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 8.306e-15 Identity = 29/42 (69.05%), Postives = 34/42 (80.95%), Query Frame = 1 Query: 76 SRIAMGPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEY 201 + + G KRLKPRARGRS+ I+KPTCHITIV+KDISL EY Sbjct: 80 AEVNKGTIMKRLKPRARGRSFAIQKPTCHITIVMKDISLDEY 121 HSP 2 Score: 36.1946 bits (82), Expect = 8.306e-15 Identity = 18/27 (66.67%), Postives = 20/27 (74.07%), Query Frame = 2 Query: 2 KLVYSAAANGIHNLGFNEGSLFIIKAE 82 KLVYSAAAN N+G NE +L I KAE Sbjct: 55 KLVYSAAANASSNMGSNEANLVISKAE 81
BLAST of DR911650 vs. ExPASy Swiss-Prot
Match: RK22_PIPCE (50S ribosomal protein L22, chloroplastic OS=Piper cenocladum GN=rpl22 PE=3 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 8.322e-15 Identity = 30/36 (83.33%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 91 GPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAE 198 G KRLKPRARGRSYLIKKPTCHITIVLKD +L E Sbjct: 100 GAVLKRLKPRARGRSYLIKKPTCHITIVLKDRTLNE 135 HSP 2 Score: 36.965 bits (84), Expect = 8.322e-15 Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = 2 Query: 2 KLVYSAAANGIHNLGFNEGSLFIIKAE 82 KL+YSAAA+ HNLGF E +I KAE Sbjct: 70 KLLYSAAASASHNLGFKEADSYISKAE 96
BLAST of DR911650 vs. ExPASy Swiss-Prot
Match: RK22_LACSA (50S ribosomal protein L22, chloroplastic OS=Lactuca sativa GN=rpl22 PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.822e-14 Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 1 Query: 91 GPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEY 201 G KRLKPRARGRS+ I+KPTCHITIV+KDISL EY Sbjct: 85 GTIVKRLKPRARGRSFAIQKPTCHITIVMKDISLDEY 121 HSP 2 Score: 35.039 bits (79), Expect = 1.822e-14 Identity = 18/27 (66.67%), Postives = 20/27 (74.07%), Query Frame = 2 Query: 2 KLVYSAAANGIHNLGFNEGSLFIIKAE 82 KLVYSAAAN N+G NE +L I KAE Sbjct: 55 KLVYSAAANASFNMGSNEVNLVISKAE 81
BLAST of DR911650 vs. ExPASy Swiss-Prot
Match: RK22_GOSBA (50S ribosomal protein L22, chloroplastic OS=Gossypium barbadense GN=rpl22 PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 2.370e-14 Identity = 36/68 (52.94%), Postives = 41/68 (60.29%), Query Frame = 1 Query: 43 GFQRRKFIHY*SRIAMGPTAKRLKPRARGRSYLIKKPTCHITIVLKDISLAEYEYRD-YLDLECSKNT 243 GF I + G T KRL PRARGRSYLIK+PTCHITI LKD+ E+E D Y+ KNT Sbjct: 78 GFNEASLIISQVAVNEGTTLKRLNPRARGRSYLIKRPTCHITIALKDL---EFEPLDRYMLRPKPKNT 142 HSP 2 Score: 37.7354 bits (86), Expect = 2.370e-14 Identity = 18/23 (78.26%), Postives = 18/23 (78.26%), Query Frame = 2 Query: 2 KLVYSAAANGIHNLGFNEGSLFI 70 KLVYSAAAN HN GFNE SL I Sbjct: 64 KLVYSAAANARHNRGFNEASLII 86 The following BLAST results are available for this feature:
BLAST of DR911650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >DR911650 ID=DR911650; Name=DR911650; organism=Citrus sinensis; type=EST; length=266bpback to top |