DR911647

Overview
NameDR911647
Unique NameDR911647
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length266
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR911647 vs. ExPASy Swiss-Prot
Match: BI1_ARATH (Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.127e-14
Identity = 40/64 (62.50%), Postives = 45/64 (70.31%), Query Frame = 1 
Query:   73 AMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIE 264
            AM+ARRREY                  FASSIFGGS +IFKFELYFGLL+FVGY+VVDTQ+IIE
Sbjct:  137 AMLARRREYLYLGGLLSSGLSMLMWLQFASSIFGGSASIFKFELYFGLLIFVGYMVVDTQEIIE 200
[Close]
BLAST of DR911647 vs. ExPASy Swiss-Prot
Match: BI1_ORYSJ (Bax inhibitor 1 OS=Oryza sativa subsp. japonica GN=BI1 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.871e-11
Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 1 
Query:   73 AMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIE 264
            A+VA+RREY                  FA+SIFG ST  F FE+YFGLL+F+GY+V DTQ+IIE
Sbjct:  138 AIVAKRREYLYLGGLLSSGLSILLWLQFAASIFGHSTGSFMFEVYFGLLIFLGYMVYDTQEIIE 201
The following BLAST results are available for this feature:
BLAST of DR911647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
BI1_ARATH1.127e-1462.50Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE... [more]
BI1_ORYSJ9.871e-1151.56Bax inhibitor 1 OS=Oryza sativa subsp. japonica GN... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_19775 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-05_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR911647 ID=DR911647; Name=DR911647; organism=Citrus sinensis; type=EST; length=266bp
AAATTGACCCAAGCATTCTGATATCTGCATTTGTGGGAACTGGGCTGGCT
TTCGCTTGTTTTTCTGTAGCATGCCATGGTTGCAAGGCGGAGAGAGTATC
TCTATCTTGGTGGCTTGCTTTCATCAGGCCTGTCCATGCTTCTTTGGTTG
CATTTTGCTTCCTCTATCTTTGGTGGTTCAACAGCTATCTTCAAGTTTGA
GTTATACTTTGGGCTGTTGGTGTTTGTTGGCTACATCGTGGTGGATACCC
AGGATATAATTGAGAA
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