EY676947

Overview
NameEY676947
Unique NameEY676947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1004
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676947 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 4.146e-61
Identity = 86/124 (69.35%), Postives = 103/124 (83.06%), Query Frame = 2
Query:    2 KRFDIFKENLRFIDEHNSQNRTYKVGLNRFADLTNEEYRSMHLGARF---GAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQE 364
            +RF+IFK+NLRF+DEHN +N +Y++GL RFADLTN+EYRS +LGA+    G +RTSL      RY  RVG+ LP+S+DWRKKGAVAEVKDQG CGSCWAFSTI AVEGIN+IVTG LI+LSEQE
Sbjct:   71 RRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSL------RYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQE 188          

HSP 2 Score: 81.2629 bits (199), Expect = 4.146e-61
Identity = 48/99 (48.48%), Postives = 61/99 (61.62%), Query Frame = 3
Query:  360 RSLVDCDTRYNEGCNGGLMDYAFEFIIDNGGIDTEENYPLQSP*W*L*HISGKMAK*FTFDEYEKFSPKWRKKLFKKGVWQITPVSGCPLKGGGQGISI 656
            + LVDCDT YNEGCNGGLMDYAFEFII NGGIDT+++YP +        I  K AK  T D YE   P + ++  KK V    P+S   ++ GG+   +
Sbjct:  187 QELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIR-KNAKVVTIDSYEDV-PTYSEESLKKAVAH-QPIS-IAIEAGGRAFQL 281          
BLAST of EY676947 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 2.193e-56
Identity = 80/125 (64.00%), Postives = 97/125 (77.60%), Query Frame = 2
Query:    2 KRFDIFKENLRFIDEHNSQN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQE 364
            +R+  F++NLR+IDEHN+       ++++GLNRFADLTNEEYR  +LG R   +R   + K S+RYL    EALP+SVDWR KGAVAE+KDQG CGSCWAFS IAAVEGIN+IVTG LISLSEQE
Sbjct:   59 RRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRR---ERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQE 180          

HSP 2 Score: 83.9593 bits (206), Expect = 2.193e-56
Identity = 48/99 (48.48%), Postives = 61/99 (61.62%), Query Frame = 3
Query:  360 RSLVDCDTRYNEGCNGGLMDYAFEFIIDNGGIDTEENYPLQSP*W*L*HISGKMAK*FTFDEYEKFSPKWRKKLFKKGVWQITPVSGCPLKGGGQGISI 656
            + LVDCDT YNEGCNGGLMDYAF+FII+NGGIDTE++YP +        ++ K AK  T D YE  +P     L K    Q  PVS   ++ GG+   +
Sbjct:  179 QELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERC-DVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQ--PVS-VAIEAGGRAFQL 273          
BLAST of EY676947 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.071e-52
Identity = 81/125 (64.80%), Postives = 98/125 (78.40%), Query Frame = 2
Query:    2 KRFDIFKENLRFIDEHNSQNR--TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSN-RYLPRV-GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQE 364
            KRF+IFK+NLRFID HN  N+  TYK+GL +F DLTN+EYR ++LGAR    R   K+K  N +Y   V G+ +P++VDWR+KGAV  +KDQG+CGSCWAFST AAVEGINKIVTG LISLSEQE
Sbjct:   72 KRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQE 196          

HSP 2 Score: 68.9366 bits (167), Expect = 3.071e-52
Identity = 27/39 (69.23%), Postives = 35/39 (89.74%), Query Frame = 3
Query:  360 RSLVDCDTRYNEGCNGGLMDYAFEFIIDNGGIDTEENYP 476
            + LVDCD  YN+GCNGGLMDYAF+FI+ NGG++TE++YP
Sbjct:  195 QELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYP 233          
BLAST of EY676947 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.630e-50
Identity = 79/125 (63.20%), Postives = 97/125 (77.60%), Query Frame = 2
Query:    2 KRFDIFKENLRFIDEHNSQNR--TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSN-RYLPRVG-EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQE 364
            +RF+IFK+NLRFID HN  N+  TYK+GL  FA+LTN+EYRS++LGAR    R   K+K  N +Y   V  + +P +VDWR+KGAV  +KDQG+CGSCWAFST AAVEGINKIVTG L+SLSEQE
Sbjct:   27 ERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQE 151          

HSP 2 Score: 68.9366 bits (167), Expect = 3.630e-50
Identity = 27/39 (69.23%), Postives = 35/39 (89.74%), Query Frame = 3
Query:  360 RSLVDCDTRYNEGCNGGLMDYAFEFIIDNGGIDTEENYP 476
            + LVDCD  YN+GCNGGLMDYAF+FI+ NGG++TE++YP
Sbjct:  150 QELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYP 188          
BLAST of EY676947 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.777e-49
Identity = 83/122 (68.03%), Postives = 96/122 (78.69%), Query Frame = 2
Query:    2 KRFDIFKENLRFIDEHNSQ-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQE 364
            +RF+IFKE LRFIDEHN+  NR+YKVGLN+FADLT+EE+RS +LG   G+ +T    K SNRY PRVG+ LP  VDWR  GAV ++K QG CG CWAFS IA VEGINKIVTG LISLSEQE
Sbjct:   61 RRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKT----KVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQE 178          

HSP 2 Score: 52.373 bits (124), Expect = 1.777e-49
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 3
Query:  360 RSLVDCD-TRYNEGCNGGLMDYAFEFIIDNGGIDTEENYP 476
            + L+DC  T+   GCNGG +   F+FII+NGGI+TEENYP
Sbjct:  177 QELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYP 216          
BLAST of EY676947 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 6.691e-49
Identity = 72/120 (60.00%), Postives = 94/120 (78.33%), Query Frame = 2
Query:    5 RFDIFKENLRFIDEHNSQNRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQE 364
            RF++FK+NL+ IDE N + ++Y +GLN FADL++EE++ M+LG +    R   + +    +  R  EA+P SVDWRKKGAVAEVK+QGSCGSCWAFST+AAVEGINKIVTG+L +LSEQE
Sbjct:   71 RFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRD-EERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQE 189          

HSP 2 Score: 68.9366 bits (167), Expect = 6.691e-49
Identity = 27/39 (69.23%), Postives = 33/39 (84.62%), Query Frame = 3
Query:  360 RSLVDCDTRYNEGCNGGLMDYAFEFIIDNGGIDTEENYP 476
            + L+DCDT YN GCNGGLMDYAFE+I+ NGG+  EE+YP
Sbjct:  188 QELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYP 226          
BLAST of EY676947 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 162.925 bits (411), Expect = 1.481e-48
Identity = 82/122 (67.21%), Postives = 95/122 (77.87%), Query Frame = 2
Query:    2 KRFDIFKENLRFIDEHNSQ-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQE 364
            +RF+IFKE LRFIDEHN+  NR+YKVGLN+FADLT+EE+RS +L    G+ +T    K SNRY PRVG+ LP  VDWR  GAV ++K QG CG CWAFS IA VEGINKIVTG LISLSEQE
Sbjct:   61 RRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKT----KVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQE 178          

HSP 2 Score: 52.373 bits (124), Expect = 1.481e-48
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 3
Query:  360 RSLVDCD-TRYNEGCNGGLMDYAFEFIIDNGGIDTEENYP 476
            + L+DC  T+   GCNGG +   F+FII+NGGI+TEENYP
Sbjct:  177 QELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYP 216          
BLAST of EY676947 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.572e-48
Identity = 75/122 (61.48%), Postives = 96/122 (78.69%), Query Frame = 2
Query:    2 KRFDIFKENLRFIDEHNS-QNRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQE 364
            +RF IFK+NL+F+DEHNS  +RT++VGL RFADLTNEE+R+++L  +    + S+K++R   YL + G+ LPD VDWR  GAV  VKDQG+CGSCWAFS + AVEGIN+I TG LISLSEQE
Sbjct:   63 RRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKTER---YLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQE 181          

HSP 2 Score: 58.151 bits (139), Expect = 5.572e-48
Identity = 24/40 (60.00%), Postives = 34/40 (85.00%), Query Frame = 3
Query:  360 RSLVDCDTRY-NEGCNGGLMDYAFEFIIDNGGIDTEENYP 476
            + LVDCD  + N GC+GG+M+YAFEFI+ NGGI+T+++YP
Sbjct:  180 QELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYP 219          
BLAST of EY676947 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.208e-44
Identity = 70/120 (58.33%), Postives = 88/120 (73.33%), Query Frame = 2
Query:    5 RFDIFKENLRFIDEHNSQNRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQE 364
            RF++F+ENL  ID+ N++  +Y +GLN FADLT+EE++  +LG      + S K + S  +  R    LP SVDWRKKGAVA VKDQG CGSCWAFST+AAVEGIN+I TG+L SLSEQE
Sbjct:   71 RFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLG--LAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQE 188          

HSP 2 Score: 64.3142 bits (155), Expect = 1.208e-44
Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 3
Query:  345 SHYPSRSLVDCDTRYNEGCNGGLMDYAFEFIIDNGGIDTEENYP 476
            S    + L+DCDT +N GCNGGLMDYAF++II  GG+  E++YP
Sbjct:  182 SSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYP 225          
BLAST of EY676947 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 6.410e-43
Identity = 63/122 (51.64%), Postives = 82/122 (67.21%), Query Frame = 2
Query:    2 KRFDIFKENLRFIDEHNSQNRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSN-RYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQE 364
            KRF++FK N   +   N  ++ YK+ LN+FAD+TN E+R+ + G++    R      R N  ++    + +P SVDWRKKGAV  VKDQG CGSCWAFSTI AVEGIN+I T  L+SLSEQE
Sbjct:   56 KRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQE 177          

HSP 2 Score: 67.3958 bits (163), Expect = 6.410e-43
Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 3
Query:  360 RSLVDCDTRYNEGCNGGLMDYAFEFIIDNGGIDTEENYPLQS 485
            + LVDCDT  N+GCNGGLMDYAFEFI   GGI TE NYP ++
Sbjct:  176 QELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEA 217          
The following BLAST results are available for this feature:
BLAST of EY676947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
RD21A_ARATH4.146e-6169.35Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ORYA_ORYSJ2.193e-5664.00Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
GCP1_ARATH3.071e-5264.80Germination-specific cysteine protease 1 OS=Arabid... [more]
CYSP4_BRANA3.630e-5063.20Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
ACTN_ACTDE1.777e-4968.03Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
XCP2_ARATH6.691e-4960.00Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
ACTN_ACTCH1.481e-4867.21Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CPR1_ARATH5.572e-4861.48Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
XCP1_ARATH1.208e-4458.33Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CYSEP_RICCO6.410e-4351.64Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-028-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676947 ID=EY676947; Name=EY676947; organism=Citrus sinensis; type=EST; length=1004bp
GAAGAGGTTTGACATCTTTAAGGAAAATCTTAGGTTTATTGATGAACATA
ACTCACAGAACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTG
ACCAACGAGGAGTACCGGTCCATGCATCTGGGTGCACGCTTTGGTGCTAA
AAGGACTTCCTTGAAATCAAAGAGGAGCAACCGTTATCTGCCACGTGTCG
GCGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCT
GAAGTTAAAGATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCAT
TGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCAC
TATCCGAGCAGGAGTTTGGTGGATTGTGATACAAGATATAATGAAGGATG
TAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAATGGAG
GTATTGACACAGAAGAAAATTACCCCCTACAAAGCCCTTGATGGTAGCTG
TGACACATATCCGGAAAAATGGCAAAGTAGTTTACATTTGATGAATATGA
AAAATTTTCCCCTAAATGGCGAAAAAAACTTTTCAAAAAGGGAGTTTGGC
AAATCACCCCCGTGAGTGGTTGCCCATTGAAGGGAGGGGGGCAGGGCATT
TCCATTTTATTTAAACCCGGGTAAATTTTACGGGGAAAAATTGGGGGAAA
TTCTCTGGGAACAGGGGGGTTTACGGGGGGTTTGGAATATGGGCAAAAAA
AAAAGGGAACCTTAAATATTTGGGATTGGTGGAAAAAAATTTTCTGGGGG
GGGCAATAAGCGGGGGGGAAAAGGGGCGGGGGATTTAATATATAGAAGAG
GGGAGAGGCAAAAACACGGGGGGGGGGGGCAGCCTCCCCCCCCAGGGGGG
GAAAAAGAGGGGGGGAGAAAATTTTGTCCTCGGTGGTAAGAGGGCGCCCC
CTCCTAATATACCTCCCACATAAAAATAAAAAAAAAAAAAGAAGGGGGAC
GCAA
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