FC871191

Overview
NameFC871191
Unique NameFC871191
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1264 contig Csv1_Contig1264:125..832. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871191 vs. ExPASy Swiss-Prot
Match: SUC1_ARATH (Sucrose transport protein SUC1 OS=Arabidopsis thaliana GN=SUC1 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.871e-38
Identity = 82/135 (60.74%), Postives = 99/135 (73.33%), Query Frame = 1
Query:   37 ITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVPPPITEAG 441
            +TK AE +R++     G      P   VK GAL++F VLGIP AITFS PFA+ASIFS  S AGQGLSLGVLNLAIV+PQM+VSL  GPFDA+ GGGN+PAF+V A+AAA+SG++ALT+LPS   D P   T  G
Sbjct:  383 VTKFAEDHRKTAGDLAG------PSASVKAGALSLFAVLGIPLAITFSTPFALASIFSSCSGAGQGLSLGVLNLAIVIPQMIVSLGGGPFDALFGGGNLPAFIVAAIAAAISGVLALTVLPSPPPDAPKATTMGG 511          
BLAST of FC871191 vs. ExPASy Swiss-Prot
Match: SUT_SPIOL (Sucrose transport protein OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.308e-38
Identity = 87/135 (64.44%), Postives = 101/135 (74.81%), Query Frame = 1
Query:   37 ITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVPPPITEAG 441
            +TK AE  R S    G A    PPP GVK GALAIF VLGIP AITFS+PFA+ASIFS +S +GQGLSLGVLNLAIVVPQM VS+ SGP+DA+ GGGN+PAF+VGAVAA  S +++ TLLPS     PPP  + G
Sbjct:  391 VTKSAEHFRDSHHIMGSAVPP-PPPAGVKGGALAIFAVLGIPLAITFSIPFALASIFSASSGSGQGLSLGVLNLAIVVPQMFVSVTSGPWDAMFGGGNLPAFVVGAVAATASAVLSFTLLPS-----PPPEAKIG 519          
BLAST of FC871191 vs. ExPASy Swiss-Prot
Match: SUC2_ARATH (Sucrose transport protein SUC2 OS=Arabidopsis thaliana GN=SUC2 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.157e-37
Identity = 81/128 (63.28%), Postives = 100/128 (78.12%), Query Frame = 1
Query:   37 ITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVP 420
            +TK AE++RR     GGA     PP  V  GAL +F +LGIPQAITFS+PFA+ASIFS  S AGQGLSLGVLNLAIVVPQM++S+  GPFD + GGGN+PAF++GA+AAA+SG++ALT+LPS   D P
Sbjct:  381 VTKQAENHRRD---HGGAK--TGPPGNVTAGALTLFAILGIPQAITFSIPFALASIFSTNSGAGQGLSLGVLNLAIVVPQMVISVGGGPFDELFGGGNIPAFVLGAIAAAVSGVLALTVLPSPPPDAP 503          
BLAST of FC871191 vs. ExPASy Swiss-Prot
Match: SUC5_ARATH (Sucrose transport protein SUC5 OS=Arabidopsis thaliana GN=SUC5 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.859e-35
Identity = 75/128 (58.59%), Postives = 94/128 (73.44%), Query Frame = 1
Query:   37 ITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVP 420
            +TK AE +R       G      P  G+K G  ++FTVLGIP AIT+S+PFA+ASIFS  S AGQGLSLGVLN+AI +PQM+VS  SGP DA  GGGN+P+F+VGA+AAA+SG++ALT+LPS   D P
Sbjct:  382 VTKSAEHHREIAGPLAG------PSSGIKAGVFSLFTVLGIPLAITYSIPFALASIFSTNSGAGQGLSLGVLNIAICIPQMIVSFSSGPLDAQFGGGNLPSFVVGAIAAAVSGVLALTVLPSPPPDAP 503          
BLAST of FC871191 vs. ExPASy Swiss-Prot
Match: SUC8_ARATH (Sucrose transport protein SUC8 OS=Arabidopsis thaliana GN=SUC8 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.812e-32
Identity = 71/121 (58.68%), Postives = 91/121 (75.21%), Query Frame = 1
Query:   37 ITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 399
            +TK AE +RR       A  +  P  G++ GAL +F +LGIP AITFS+PFA+ASI S +S AGQGLSLGVLN+AIV+PQM+VS   GP DA+ GGGN+P F+VGA+AAA+S +VA T+LP
Sbjct:  378 VTKKAEEHRRI------AGPMALPTDGIRAGALTLFALLGIPLAITFSIPFALASIISSSSGAGQGLSLGVLNMAIVIPQMIVSFGVGPIDALFGGGNLPRFVVGAIAAAISSVVAFTVLP 492          
BLAST of FC871191 vs. ExPASy Swiss-Prot
Match: SUC9_ARATH (Sucrose transport protein SUC9 OS=Arabidopsis thaliana GN=SUC9 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.416e-31
Identity = 69/121 (57.02%), Postives = 91/121 (75.21%), Query Frame = 1
Query:   37 ITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 399
            +TK AE +R+       A  +  P   ++ GAL++F +LGIP AITFS+PFA+ASI S +S AGQGLSLGVLN+AIV+PQM+VS   GP DA+ GGGN+P F+VGA+AA +S +VALT+LP
Sbjct:  377 VTKKAEEHRKI------AGRMALPTNAIRDGALSLFAILGIPLAITFSIPFALASIISSSSGAGQGLSLGVLNMAIVIPQMIVSFGVGPIDALFGGGNLPGFVVGAIAALISSVVALTVLP 491          
BLAST of FC871191 vs. ExPASy Swiss-Prot
Match: SUC6_ARATH (Putative sucrose transport protein SUC6 OS=Arabidopsis thaliana GN=SUC6 PE=5 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.767e-31
Identity = 69/121 (57.02%), Postives = 90/121 (74.38%), Query Frame = 1
Query:   37 ITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 399
            +TK AE +RR       A  +  P  G++ GAL +F +LGIP AITFS+PFA+ASI S +S AGQGLSLGVLN+ IV+PQM+VS   GP DA+ GGGN+P F+VGA+AAA+S +VA ++LP
Sbjct:  378 VTKKAEEHRRI------AGPMALPTDGIRAGALTLFALLGIPLAITFSIPFALASIISSSSGAGQGLSLGVLNMTIVIPQMVVSFGVGPIDALFGGGNLPGFVVGAIAAAISSVVAFSVLP 492          
BLAST of FC871191 vs. ExPASy Swiss-Prot
Match: SUC7_ARATH (Putative sucrose transport protein SUC7 OS=Arabidopsis thaliana GN=SUC7 PE=5 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.862e-30
Identity = 70/121 (57.85%), Postives = 89/121 (73.55%), Query Frame = 1
Query:   37 ITKLAESNRRSVTTAGGATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 399
            +TK AE +RR       A  +  P  G++ GAL +F +LGIP AITFS+PFA+ASI S +S AGQ LSLGVLN+AIV+PQM+VS   GP DA+ G GN+P F+VGA+AAA+S IVA T+LP
Sbjct:  377 VTKKAEEHRRI------AGPMALPTDGIRAGALTLFALLGIPLAITFSIPFALASIISSSSGAGQRLSLGVLNMAIVIPQMIVSFGVGPIDALFGDGNLPGFVVGAIAAAVSSIVAFTVLP 491          
BLAST of FC871191 vs. ExPASy Swiss-Prot
Match: SUC4_ARATH (Sucrose transport protein SUC4 OS=Arabidopsis thaliana GN=SUC4 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26
Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 1
Query:  106 PPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTADVPPPI 429
            PP  +   A+ IFT+LGIP AIT+SVP+A+ SI   +   GQGLSLGVLNLAIV+PQ++VS+ SGP+D + GGGN PA  VGA    + GIVA+  LP T    P P+
Sbjct:  402 PPASIVFAAVLIFTILGIPLAITYSVPYALISIRIESLGLGQGLSLGVLNLAIVIPQVIVSVGSGPWDQLFGGGNSPALAVGAATGFIGGIVAILALPRTRIQKPIPL 509          
BLAST of FC871191 vs. ExPASy Swiss-Prot
Match: SUT2_ORYSJ (Sucrose transport protein 2 OS=Oryza sativa subsp. japonica GN=SUT2 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.347e-24
Identity = 52/98 (53.06%), Postives = 73/98 (74.49%), Query Frame = 1
Query:  106 PPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 399
            PP G+ + +L +FT+LG P AIT+S+P+AMA+        GQGL++G+LNLAIV+PQ++VSL SGP+D + GGGN PAF V A A+ + G+VA+  LP
Sbjct:  392 PPTGIVIASLVVFTILGAPLAITYSIPYAMAASRVENLGLGQGLAMGILNLAIVIPQVIVSLGSGPWDQLFGGGNAPAFAVAAAASFIGGLVAILGLP 489          
The following BLAST results are available for this feature:
BLAST of FC871191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SUC1_ARATH4.871e-3860.74Sucrose transport protein SUC1 OS=Arabidopsis thal... [more]
SUT_SPIOL8.308e-3864.44Sucrose transport protein OS=Spinacia oleracea PE=... [more]
SUC2_ARATH3.157e-3763.28Sucrose transport protein SUC2 OS=Arabidopsis thal... [more]
SUC5_ARATH3.859e-3558.59Sucrose transport protein SUC5 OS=Arabidopsis thal... [more]
SUC8_ARATH6.812e-3258.68Sucrose transport protein SUC8 OS=Arabidopsis thal... [more]
SUC9_ARATH4.416e-3157.02Sucrose transport protein SUC9 OS=Arabidopsis thal... [more]
SUC6_ARATH5.767e-3157.02Putative sucrose transport protein SUC6 OS=Arabido... [more]
SUC7_ARATH2.862e-3057.85Putative sucrose transport protein SUC7 OS=Arabido... [more]
SUC4_ARATH5.586e-2654.63Sucrose transport protein SUC4 OS=Arabidopsis thal... [more]
SUT2_ORYSJ2.347e-2453.06Sucrose transport protein 2 OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3DC02FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3DC02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871191 ID=FC871191; Name=FC871191; organism=Citrus sinensis; type=EST; length=708bp
TTCTTGTTGGCGCTTTCTTTGGCTTTCACCTTTTTGATTACCAAATTGGC
CGAGTCCAACCGCCGGTCCGTCACCACAGCAGGCGGCGCCACCCATATCT
TGCCGCCGCCGGTTGGTGTGAAAGTTGGCGCTTTGGCTATCTTCACTGTG
TTGGGAATTCCTCAAGCTATTACTTTCAGCGTTCCGTTTGCTATGGCATC
CATATTTTCTAGAACTTCTGCTGCTGGTCAAGGGCTTTCGTTGGGTGTTT
TGAATCTTGCAATAGTTGTTCCACAGATGCTGGTGTCTTTACTTAGCGGA
CCCTTTGATGCCGTTTGCGGAGGTGGCAACATGCCGGCCTTTATGGTCGG
CGCAGTTGCGGCTGCCTTAAGTGGTATCGTTGCACTCACCCTGCTCCCAT
CAACAACCGCGGATGTTCCCCCGCCGATAACTGAAGCCGGAACTGCAACC
GCAAATCAAACTAATAAGCTCTAGCTAGTCTTAGTTTGTTGGAAGAAAAG
AAGGGACAGACTTTTACTTTTTTTTTAAGTCATCCGAAATGTGCCTAACC
CCTGAGTATCTTTGGGAAAATAATTCTGCTGGTAAGTAAATGAATGTGGT
GCATGGCTGCAAGGCTTGTGTGTGTATGGAGTTTAAATGTATGTTGTTAC
TTGTAAGTGAGTGAAATAATTGACAAGGTGTTTGTTCGTAAAAAAAAAAA
AAAAAAAA
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