FC871173

Overview
NameFC871173
Unique NameFC871173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length446
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:674..1120. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 14337_SOLLC (14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 5.533e-21
Identity = 52/59 (88.14%), Postives = 54/59 (91.53%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES 178
            LAKQ FDEAIAELDSL+EESYKDSTLIMQLLRDNLTLWTSDL EEGGE SKGDE Q E+
Sbjct:  195 LAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNLTLWTSDL-EEGGEHSKGDERQGEN 252          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 1433_TOBAC (14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.610e-20
Identity = 51/59 (86.44%), Postives = 53/59 (89.83%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES 178
            LAKQ FDEAIAELDSL+EESYKDSTLIMQLLRDN TLWTSDL EEGGE SKGDE Q E+
Sbjct:  194 LAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNFTLWTSDL-EEGGEHSKGDERQGEN 251          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 14310_ARATH (14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana GN=GRF10 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 7.989e-20
Identity = 50/60 (83.33%), Postives = 54/60 (90.00%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKG-DEVQAES 178
            LAKQ FD+AIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDL EEG E++KG DE Q E+
Sbjct:  195 LAKQAFDDAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLNEEGDERTKGADEPQDEN 254          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 8.833e-19
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQS-KGDEVQAE 175
            LAKQ FDEAIAELD+L+EESYKDSTLIMQLLRDNLTLWTSDLPE+GGE + K +E + E
Sbjct:  200 LAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNIKTEESKQE 258          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 14339_SOLLC (14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.154e-18
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 160
            LAKQ FDEAI+ELDSLNE+SYKDSTLIMQLLRDNLTLWTSDLPE+  +  KGD
Sbjct:  197 LAKQAFDEAISELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLPEDAEDAQKGD 249          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.154e-18
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 160
            LAKQVFDEAI+ELDSLNE++YKD TLI+QLLRDNLTLWTSD+PE+G E  KGD
Sbjct:  197 LAKQVFDEAISELDSLNEDNYKDGTLILQLLRDNLTLWTSDIPEDGEEAPKGD 249          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 5.725e-18
Identity = 45/58 (77.59%), Postives = 52/58 (89.66%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAE 175
            LAKQ FDEAI+ELD+L+EESYKDSTLIMQLLRDNLTLWTSD+PE+G EQ K D  +A+
Sbjct:  197 LAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEEQ-KVDSARAD 253          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 1433B_VICFA (14-3-3-like protein B OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 5.725e-18
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 160
            LAKQ FDEAI+ELD+LNEESYKDSTLIMQLLRDNLTLWTSD+PE+G +  K +
Sbjct:  197 LAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDSQKAN 249          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 5.725e-18
Identity = 46/62 (74.19%), Postives = 51/62 (82.26%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGG----EQSKGDEVQAE 175
            LAKQ FDEAI+ELD+L EESYKDSTLIMQLLRDNLTLWTSDL E+GG    E SKGD  + +
Sbjct:  195 LAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDLTEDGGDEVKEASKGDACEGQ 256          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 9.766e-18
Identity = 42/51 (82.35%), Postives = 47/51 (92.16%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 154
            LAKQ FDEAI+ELD+LNEESYKDSTLIMQLLRDNLTLWTSD+PE+G +  K
Sbjct:  197 LAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 247          
The following BLAST results are available for this feature:
BLAST of FC871173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
14337_SOLLC5.533e-2188.1414-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 P... [more]
1433_TOBAC1.610e-2086.4414-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1[more]
14310_ARATH7.989e-2083.3314-3-3-like protein GF14 epsilon OS=Arabidopsis th... [more]
14312_ARATH8.833e-1979.6614-3-3-like protein GF14 iota OS=Arabidopsis thali... [more]
14339_SOLLC1.154e-1883.0214-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 P... [more]
14338_SOLLC1.154e-1881.1314-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]
1433C_SOYBN5.725e-1877.5914-3-3-like protein C OS=Glycine max GN=GF14C PE=2... [more]
1433B_VICFA5.725e-1879.2514-3-3-like protein B OS=Vicia faba PE=2 SV=1[more]
14333_ORYSJ5.725e-1874.1914-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
1433D_SOYBN9.766e-1882.3514-3-3-like protein D OS=Glycine max GN=GF14D PE=2... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3DB06FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3DB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871173 ID=FC871173; Name=FC871173; organism=Citrus sinensis; type=EST; length=446bp
CCTGGCTAAACAAGTATTTGATGAGGCTATTGCTGAACTTGATAGCCTTA
ATGAAGAGTCCTACAAGGACAGCACCCTTATTATGCAGCTTCTTCGGGAT
AATCTCACCTTGTGGACCTCGGATCTACCGGAGGAGGGAGGTGAGCAATC
TAAAGGTGATGAAGTTCAAGCAGAGAGCTAGCCGGGGATGCATGAGCATC
AGGAGGAGAAATTGTGCTAGTTGGGTTCTAATATCTATTAGTATTAGTAG
TATAGGGATTGAAAGAACATTTGGCTTGTATAATACTTATTACATGTTTT
TAATTTCAGGTTGTTGTGCTATTTTCTGTTTACATATAATTGAGTTTGCT
ACTTCTCGTGATAGGACTTGCTATGCTATTTTAGTGCTAGTTTGAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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