FC871161
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871161 vs. ExPASy Swiss-Prot
Match: BLC_CITFR (Outer membrane lipoprotein blc OS=Citrobacter freundii PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.882e-14 Identity = 39/117 (33.33%), Postives = 62/117 (52.99%), Query Frame = 2 Query: 212 ATYTLNEDGTVHVRNETWSDGKR--GSIEGTAY-KADPKSDEAKLXXXXXXXXXXXXXXXXGNYWVLYIDDNYQYALIGEPTRKYLWILCREPHMDEAIYNQLVEKATSEGYDVSKL 553 ATY+L +DG ++V N+ ++ + EG AY DP + K+ G Y V+ +D Y++AL+ P R YLWIL R P + + + Q++ AT EG++V+KL Sbjct: 62 ATYSLRDDGGINVINKGYNPDREMWQKTEGKAYFTGDPSTAALKVSFFGPFY---------GGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEMKQQMLAIATREGFEVNKL 169 HSP 2 Score: 36.5798 bits (83), Expect = 1.882e-14 Identity = 16/41 (39.02%), Postives = 24/41 (58.54%), Query Frame = 3 Query: 102 KEMEVVRGLDIKRYMGRWYEIASFPSRNQPIMERIRGLLTL 224 K + VV D KRY+G WYEIA F R + ++++ +L Sbjct: 26 KGVTVVNNFDAKRYLGTWYEIARFDHRFERGLDKVTATYSL 66
BLAST of FC871161 vs. ExPASy Swiss-Prot
Match: BLC_ECOLI (Outer membrane lipoprotein blc OS=Escherichia coli (strain K12) GN=blc PE=1 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 1.529e-13 Identity = 38/115 (33.04%), Postives = 58/115 (50.43%), Query Frame = 2 Query: 212 ATYTLNEDGTVHVRNETWSD--GKRGSIEGTAYKADPKSDEAKLXXXXXXXXXXXXXXXXGNYWVLYIDDNYQYALIGEPTRKYLWILCREPHMDEAIYNQLVEKATSEGYDVSK 550 ATY+L +DG ++V N+ ++ G EG AY + A G Y V+ +D Y++AL+ P R YLWIL R P + + + +++ AT EG+DVSK Sbjct: 62 ATYSLRDDGGLNVINKGYNPDRGMWQQSEGKAYFTGAPTRAA--------LKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVATREGFDVSK 168 HSP 2 Score: 36.5798 bits (83), Expect = 1.529e-13 Identity = 16/37 (43.24%), Postives = 22/37 (59.46%), Query Frame = 3 Query: 114 VVRGLDIKRYMGRWYEIASFPSRNQPIMERIRGLLTL 224 VV D KRY+G WYEIA F R + +E++ +L Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFERGLEKVTATYSL 66
BLAST of FC871161 vs. ExPASy Swiss-Prot
Match: BLC_ECO57 (Outer membrane lipoprotein blc OS=Escherichia coli O157:H7 GN=blc PE=3 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 1.529e-13 Identity = 38/115 (33.04%), Postives = 58/115 (50.43%), Query Frame = 2 Query: 212 ATYTLNEDGTVHVRNETWSD--GKRGSIEGTAYKADPKSDEAKLXXXXXXXXXXXXXXXXGNYWVLYIDDNYQYALIGEPTRKYLWILCREPHMDEAIYNQLVEKATSEGYDVSK 550 ATY+L +DG ++V N+ ++ G EG AY + A G Y V+ +D Y++AL+ P R YLWIL R P + + + +++ AT EG+DVSK Sbjct: 62 ATYSLRDDGGLNVINKGYNPDRGMWQQSEGKAYFTGAPTRAA--------LKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVATREGFDVSK 168 HSP 2 Score: 36.5798 bits (83), Expect = 1.529e-13 Identity = 16/37 (43.24%), Postives = 22/37 (59.46%), Query Frame = 3 Query: 114 VVRGLDIKRYMGRWYEIASFPSRNQPIMERIRGLLTL 224 VV D KRY+G WYEIA F R + +E++ +L Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFERGLEKVTATYSL 66
BLAST of FC871161 vs. ExPASy Swiss-Prot
Match: YR877_MIMIV (Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R877 PE=1 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 2.096e-12 Identity = 39/121 (32.23%), Postives = 59/121 (48.76%), Query Frame = 2 Query: 203 DTRATYTLNEDGTVHVRNETWSDGKRGSIEGTAYKADPKSDEAKLXXXXXXXXXXXXXXXXGNYWVLYIDDNYQYALI--GEPTRKYLWILCREPHMDEAIYNQLVEKATSEGYDVSKLHR 559 ++ A Y L E + V N +G+ S+ GTA A + Y V++ID+NYQYA++ G T LWIL R +++++ YNQLV ++GYDV+ L R Sbjct: 53 NSTANYQLLEPNKIQVTNNCEINGRINSVTGTAIPA--ANTRIVSGFLTPASLMVNFGYGFSPYNVIFIDENYQYAIVSGGNDT---LWILSRFKNINQSTYNQLVTIVYNQGYDVNNLIR 168 HSP 2 Score: 36.5798 bits (83), Expect = 2.096e-12 Identity = 16/31 (51.61%), Postives = 21/31 (67.74%), Query Frame = 3 Query: 96 SKKEMEVVRGLDIKRYMGRWYEIASFPSRNQ 188 SK+++ LDI+RYMG WYEIA P+ Q Sbjct: 18 SKRDVVSQSSLDIQRYMGTWYEIARLPTSFQ 48 The following BLAST results are available for this feature:
BLAST of FC871161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871161 ID=FC871161; Name=FC871161; organism=Citrus sinensis; type=EST; length=876bpback to top |