FC871129

Overview
NameFC871129
Unique NameFC871129
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13480 contig Csv1_Contig13480:1..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC871129 vs. ExPASy Swiss-Prot
Match: ITPK4_ARATH (Inositol-tetrakisphosphate 1-kinase 4 OS=Arabidopsis thaliana GN=ITPK4 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 8.848e-63
Identity = 73/111 (65.77%), Postives = 88/111 (79.28%), Query Frame = 3 
Query:  351 PNSGILMKSYERNGLRPILFDSLKSLPIDTENQNSGDSISCTVDLDLELIKDAAKWLAKTLDLTIFGFDVVIQEGTGDHVIVDLNYLPSFKEIDKDIAILAFWDAIKLKFE 683
            P+S  L KS E NGL+PILFDSLKSLP+D+ NQN         ++DLEL+ +AA WL K LDLTIFGFDVVIQEGTGDHVIVDLNYLPSFKE+  +IA+ AFW+AI+ +F+
Sbjct:  377 PSSSSLRKSAEENGLKPILFDSLKSLPVDSANQNP------VSEIDLELVTEAATWLRKKLDLTIFGFDVVIQEGTGDHVIVDLNYLPSFKEVPDNIAVPAFWEAIRNRFD 481

HSP 2 Score: 114.39 bits (285), Expect = 8.848e-63
Identity = 59/112 (52.68%), Postives = 73/112 (65.18%), Query Frame = 1 
Query:    1 QRFMEDHSDFLAIDPLSNIYPVXXXXXXXXXXXXXXEQKAKGRHAIRGAHFLKVIDFKDPGLPQRLSDAQLSLPCIVKPQVACGTADSHSMAIVFGTEDFKDLNVPIPAVVQ 336
            +++MED +    +DP+ NIYPV                 A GR  IRGA FLK+  + +P L Q LS A LSLPCIVKPQVACG AD+HSMAIVF  EDFK+LN P+PA++Q
Sbjct:  239 KKYMEDQNACAIVDPIRNIYPVVDRLKMQHILLGLEGLGAAGRK-IRGACFLKIDSYDEPDLAQNLSRAGLSLPCIVKPQVACGVADAHSMAIVFRVEDFKNLNTPVPAIIQ 349
The following BLAST results are available for this feature:
BLAST of FC871129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ITPK4_ARATH8.848e-6365.77Inositol-tetrakisphosphate 1-kinase 4 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAK2AA10FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2AA10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871129 ID=FC871129; Name=FC871129; organism=Citrus sinensis; type=EST; length=781bp
CAAAGATTTATGGAAGACCACTCAGATTTCCTCGCAATTGACCCACTCAG
TAACATTTACCCTGTACTGGATCGGCTAAAGATCCAACTGATTCTACTTA
GGCTGCAAGAACAAAAAGCTAAAGGACGACATGCAATTAGGGGCGCCCAT
TTTCTTAAGGTTATTGATTTTAAAGATCCTGGCTTGCCACAAAGATTGTC
AGATGCACAACTTTCTCTTCCCTGTATAGTGAAACCTCAAGTTGCATGTG
GTACGGCTGATTCTCACAGTATGGCAATTGTCTTTGGAACTGAAGATTTT
AAAGATTTGAATGTTCCTATTCCTGCTGTTGTTCAGTTAAGAAGTCTACT
CCAAACTCTGGTATTCTGATGAAATCGTATGAAAGGAATGGACTTAGACC
TATCCTCTTTGACAGCTTAAAATCTCTACCCATCGACACTGAAAATCAAA
ATTCAGGAGATTCGATTTCCTGTACGGTTGATCTTGATCTTGAACTGATC
AAAGATGCTGCAAAGTGGCTTGCAAAAACACTTGATCTGACCATCTTTGG
ATTTGATGTTGTCATTCAAGAAGGCACTGGTGACCATGTCATTGTAGATT
TAAACTACCTTCCATCATTCAAGGAAATAGATAAAGATATCGCCATACTC
GCTTTTTGGGATGCCATTAAACTGAAGTTTGAAGCAATAAAGATGCAACA
AGCAACTATAGCTTCCTCATCTTGAGCGTCATCTGCAGCTTGTTGGTCGG
GTAAGTAACTTTATGTAAATTCACCGACACT
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