EY680426

Overview
NameEY680426
Unique NameEY680426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC_ARATH (V-type proton ATPase subunit C OS=Arabidopsis thaliana GN=VHA-C PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 4.625e-86
Identity = 170/249 (68.27%), Postives = 196/249 (78.71%), Query Frame = 1
Query:   34 MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTEDIITSKHLVTLLCCLSPSTPRRIGWLPMRS*LAMW-SPSSPKLLYEDNEYAPLPGPTNLEVLQNNSKKPAREKGFQ 777
            M SRYWVVSLPV++SA+S+WNRLQEQISKHSFDTP+YRFNIPNLRVGT           +KSNSFVE VS KIRRQIEELER+SG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E+VD I + VAKIEDDLKVRVAEYNN+R QLNAINRKQSGSLAVRDLSNLVK EDI+ S+HLVTLL  +   + +   WL     L  +  P S K L+EDNEYA L   T    + +N +  AREKGFQ
Sbjct:    1 MTSRYWVVSLPVKDSASSLWNRLQEQISKHSFDTPVYRFNIPNLRVGTLDSLLALGDDLLKSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKEVVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVESEHLVTLLAVVPKYSQK--DWLACYETLTDYVVPRSSKKLFEDNEYA-LYTVTLFTRVADNFRIAAREKGFQ 246          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC_HORVU (V-type proton ATPase subunit C OS=Hordeum vulgare GN=VATC PE=1 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.911e-72
Identity = 151/254 (59.45%), Postives = 181/254 (71.26%), Query Frame = 1
Query:   34 MASRYWVVSLPV--QNSAA---SVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTEDIITSKHLVTLLCCLSPSTPRRIGWLPMRS*LAMW-SPSSPKLLYEDNEYAPLPGPTNLEVLQNNSKKPAREKGFQ 777
            MA+RYW+ +LPV   N AA   ++W RLQE IS+HSFDTPLYRF +P+LR GT           VKSN F+E VSHKIRRQIE+LER  G+E  +L+VDGVPVD+YLTRFVWDE KYP  +PL+E V  I + VAKIEDD+KVRVAEY NV+SQL AINRKQ+GSLAVRDLSNL+K ED++TS+HLVTLL  +   + +   WL     L  +  P S K LYEDNEYA L   T    + +N K  AREKGFQ
Sbjct:    1 MATRYWIAALPVADDNVAAGKTALWARLQEAISRHSFDTPLYRFTVPDLRPGTLDSLLALSDDLVKSNIFIEGVSHKIRRQIEDLERAGGVEPGTLTVDGVPVDSYLTRFVWDEGKYPVNAPLKETVASIQSQVAKIEDDMKVRVAEYGNVKSQLGAINRKQTGSLAVRDLSNLIKPEDMVTSEHLVTLLSIVPKYSQK--DWLASYESLDTFVVPRSSKKLYEDNEYA-LYTVTLFAKVVDNFKVHAREKGFQ 251          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VTC1A_DANRE (V-type proton ATPase subunit C 1-A OS=Danio rerio GN=atp6v1c1a PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.747e-28
Identity = 76/222 (34.23%), Postives = 125/222 (56.31%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*LA-MWSPSSPKLLYEDNE 696
            + +W++S P + +    W++L    ++ +  +   +FNIP+L+VGT            K ++FVESV  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + I   V++I++DLK R + YNN++  L  + RK +GSL  R L+++VK +D ++ S++L+TLL  + P T     W      LA M  P S  LL+ED++
Sbjct:    2 TEFWLISAPGEKTCQQTWDKLMTATTRTNNLSTNNKFNIPDLKVGTLDVLVGLSDELAKLDAFVESVVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYVTRFQWDMAKYPIKQSLKNISEIISKQVSQIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKDDFVLDSEYLITLLVVV-PKT-NYTDWQRTYETLAEMVVPRSTNLLFEDHD 221          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VTC1B_DANRE (V-type proton ATPase subunit C 1-B OS=Danio rerio GN=atp6v1c1b PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.280e-27
Identity = 82/248 (33.06%), Postives = 132/248 (53.23%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*LA-MWSPSSPKLLYEDNEYAPLPGPTNLEVLQNNSKKPAREKGF 774
            + +W++S P   +    W+++    ++ +  +   +FNIP L+VGT            K ++FVESV  KI + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + +   V +I++DLK R + YN+++  L ++ RK  GSL  R L+++VK ED ++ S++L TLL  +S +      W      L+ M  P S KLL+ED E + L   T      ++ K+ ARE  F
Sbjct:    2 TEFWLISAPGDKTCQQTWDKMNMATAESNNLSTNNKFNIPELKVGTLDVLVGLSDELAKLDTFVESVVKKIAQYMTDVLEDSRDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKSISEIMSKQVTQIDNDLKARASAYNSLKGSLQSLERKNVGSLLTRSLADIVKKEDFVLDSEYLTTLLVIVSKTNYPE--WQKTYETLSEMVVPRSTKLLFEDQE-SGLFSVTLFTKAIDDFKQQARENKF 246          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC1_PONAB (V-type proton ATPase subunit C 1 OS=Pongo abelii GN=ATP6V1C1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.725e-27
Identity = 75/222 (33.78%), Postives = 118/222 (53.15%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*LA-MWSPSSPKLLYEDNE 696
            + +W++S P + +    W +L    SK++      +FNIP+L+VGT            K ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ S++LVTLL  +         W+     LA M  P S  +L ED +
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHN--DWIKQYETLAEMVVPRSSNVLSEDQD 221          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC1_MACFA (V-type proton ATPase subunit C 1 OS=Macaca fascicularis GN=ATP6V1C1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.725e-27
Identity = 75/222 (33.78%), Postives = 118/222 (53.15%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*LA-MWSPSSPKLLYEDNE 696
            + +W++S P + +    W +L    SK++      +FNIP+L+VGT            K ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ S++LVTLL  +         W+     LA M  P S  +L ED +
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHN--DWIKQYETLAEMVVPRSSNVLSEDQD 221          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC1_HUMAN (V-type proton ATPase subunit C 1 OS=Homo sapiens GN=ATP6V1C1 PE=1 SV=4)

HSP 1 Score: 122.094 bits (305), Expect = 3.725e-27
Identity = 75/222 (33.78%), Postives = 118/222 (53.15%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*LA-MWSPSSPKLLYEDNE 696
            + +W++S P + +    W +L    SK++      +FNIP+L+VGT            K ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ S++LVTLL  +         W+     LA M  P S  +L ED +
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHN--DWIKQYETLAEMVVPRSSNVLSEDQD 221          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC1_RAT (V-type proton ATPase subunit C 1 OS=Rattus norvegicus GN=Atp6v1c1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.084e-26
Identity = 80/248 (32.26%), Postives = 128/248 (51.61%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*LA-MWSPSSPKLLYEDNEYAPLPGPTNLEVLQNNSKKPAREKGF 774
            + +W++S P + +    W +L    +K++      +FNIP+L+VGT            K ++FVE V  K+ + + + LE        +L   GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ S++LVTLL  +         W+     LA M  P S  +L ED + + L   T  +   ++ +  ARE  F
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHN--DWIKQYETLAEMVVPRSSNVLSEDQD-SYLCNVTLFKKAVDDFRHKARENKF 246          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC1_BOVIN (V-type proton ATPase subunit C 1 OS=Bos taurus GN=ATP6V1C1 PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 1.084e-26
Identity = 74/222 (33.33%), Postives = 118/222 (53.15%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*LA-MWSPSSPKLLYEDNE 696
            + +W++S P + +    W +L    +K++      +FNIP+L+VGT            K ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ S++LVTLL  +         W+     LA M  P S  +L ED +
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHN--DWIKQYETLAEMVVPRSSNVLSEDQD 221          
BLAST of EY680426 vs. ExPASy Swiss-Prot
Match: VATC1_MOUSE (V-type proton ATPase subunit C 1 OS=Mus musculus GN=Atp6v1c1 PE=1 SV=4)

HSP 1 Score: 120.168 bits (300), Expect = 1.415e-26
Identity = 74/222 (33.33%), Postives = 117/222 (52.70%), Query Frame = 1
Query:   40 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKTED-IITSKHLVTLLCCLSPSTPRRIGWLPMRS*LA-MWSPSSPKLLYEDNE 696
            + +W++S P + +    W +L    +K++      +FNIP+L+VGT            K ++FVE V  K+ + + + LE        +L   GV + TY+TRF WD AKYP    L+ I + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ S++LVTLL  +         W+     LA M  P S  +L ED +
Sbjct:    2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHN--DWIKQYETLAEMVVPRSSNVLSEDQD 221          
The following BLAST results are available for this feature:
BLAST of EY680426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
VATC_ARATH4.625e-8668.27V-type proton ATPase subunit C OS=Arabidopsis thal... [more]
VATC_HORVU2.911e-7259.45V-type proton ATPase subunit C OS=Hordeum vulgare ... [more]
VTC1A_DANRE5.747e-2834.23V-type proton ATPase subunit C 1-A OS=Danio rerio ... [more]
VTC1B_DANRE1.280e-2733.06V-type proton ATPase subunit C 1-B OS=Danio rerio ... [more]
VATC1_PONAB3.725e-2733.78V-type proton ATPase subunit C 1 OS=Pongo abelii G... [more]
VATC1_MACFA3.725e-2733.78V-type proton ATPase subunit C 1 OS=Macaca fascicu... [more]
VATC1_HUMAN3.725e-2733.78V-type proton ATPase subunit C 1 OS=Homo sapiens G... [more]
VATC1_RAT1.084e-2632.26V-type proton ATPase subunit C 1 OS=Rattus norvegi... [more]
VATC1_BOVIN1.084e-2633.33V-type proton ATPase subunit C 1 OS=Bos taurus GN=... [more]
VATC1_MOUSE1.415e-2633.33V-type proton ATPase subunit C 1 OS=Mus musculus G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-H12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680426 ID=EY680426; Name=EY680426; organism=Citrus sinensis; type=EST; length=814bp
CAGAGCGAAAGTGAGAGTGAAAGTGATCGTGAAATGGCATCAAGGTACTG
GGTGGTGTCTCTTCCAGTACAAAATTCAGCCGCTTCTGTTTGGAATCGAT
TACAGGAACAAATCTCTAAACATTCATTTGACACTCCTCTTTACAGGTTT
AATATCCCCAACCTCCGTGTTGGAACCCTAGATTCACTCCTTGCACTTAG
CGATGATCTCGTGAAGTCAAATAGCTTTGTTGAATCAGTATCTCACAAGA
TCAGGCGACAGATTGAGGAACTGGAGAGGGTATCAGGCATAGAGAGTAGT
TCTTTGAGTGTTGATGGAGTACCAGTTGATACTTATCTCACTAGGTTTGT
TTGGGATGAAGCAAAGTACCCAACTATGTCACCTTTAAGGGAAATTGTGG
ATGGCATTCATACTCTTGTGGCAAAGATTGAAGACGATCTTAAGGTTCGT
GTTGCTGAGTATAATAATGTCCGCAGTCAGCTGAATGCTATTAATCGAAA
GCAAAGTGGAAGCTTAGCTGTTCGTGATCTTTCCAATCTGGTAAAAACAG
AGGATATCATTACCTCAAAACATCTTGTAACCCTTCTTTGCTGTTTGTCC
CCAAGTACTCCCAGAAGGATTGGTTGGCTACCTATGAGAAGTTGACTAGC
TATGTGGTCCCCAAGTTCTCCAAAGCTATTGTATGAAGATAATGAATATG
CCCCTTTACCCGGTCCAACTAATTTGGAGGTGTTGCAAAACAATTCAAAA
AAACCTGCCCGTGAAAAAGGGTTCCAAAATTCGTGAATTTGAAAAAAAAT
TCTGAAACCAAAAA
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