EY680150

Overview
NameEY680150
Unique NameEY680150
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680150 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 9.466e-85
Identity = 163/214 (76.17%), Postives = 181/214 (84.58%), Query Frame = 3
Query:   69 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMNARKIGKWQCLEKPAKLNRQRYREAA*IIKKGKRGCL 704
            PLS NGSGA  S VPS++FFG+SLKK +++ P  K  S +FKI A E+ E++QT KD+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN MDG YIAPAFMDKLVVHITKNF+SLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMM+A ++      E PAKL RQRYREAA IIKKGK  CL
Sbjct:   15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAADIIKKGKMCCL 225          
BLAST of EY680150 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 9.466e-85
Identity = 163/214 (76.17%), Postives = 181/214 (84.58%), Query Frame = 3
Query:   69 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMNARKIGKWQCLEKPAKLNRQRYREAA*IIKKGKRGCL 704
            PLS NGSGA  S VPS++FFG+SLKK +++ P  K  S +FKI A E+ E++QT KD+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN MDG YIAPAFMDKLVVHITKNF+SLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMM+A ++      E PAKL RQRYREAA IIKKGK  CL
Sbjct:   15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAADIIKKGKMCCL 225          
BLAST of EY680150 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 3.045e-83
Identity = 155/208 (74.52%), Postives = 175/208 (84.13%), Query Frame = 3
Query:   69 PLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMNARKIGKWQCLEKPAKLNRQRYREAA*IIKKGK 692
            P + NGS ++ SVPSS+F G+SLKKV+SR   SKV S S +I A VDE+KQT KDRWKGLA+D SDDQQDITRGKG VDSLFQAP G+GTH+A+MSSY+YIS GLR YN DN MDG YIAPAFMDKLVVHITKNFM+LPN+KVPLILGIWGGKGQGKSFQCELVFAKM I+PIMM+A ++      E PAKL RQRYREAA II+KGK
Sbjct:   15 PPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGE-PAKLIRQRYREAADIIRKGK 221          
BLAST of EY680150 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.083e-80
Identity = 154/211 (72.99%), Postives = 174/211 (82.46%), Query Frame = 3
Query:   72 LSFNGSGAATSVPSSSFFGTSLKKV-SSRIPPSKVPSASFKITA---EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMNARKIGKWQCLEKPAKLNRQRYREAA*IIKKGK 692
            L+ NGSG   S PSS+FFGTSLKKV SSR+P SK+ S SFKI A   E++E +QT+ DRW+GLAYD SDDQQDITRGKG VDSLFQAPM  GTHYAV+SS+ Y+S GLR YN DN  DG YIAPAF+DKLVVHI KNFM+LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMM+A ++      E PAKL RQRYREA+ +IKKGK
Sbjct:   16 LNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQRYREASDLIKKGK 225          
BLAST of EY680150 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2)

HSP 1 Score: 299.671 bits (766), Expect = 1.415e-80
Identity = 157/211 (74.41%), Postives = 175/211 (82.94%), Query Frame = 3
Query:   72 LSFNGSGAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITA---EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMNARKIGKWQCLEKPAKLNRQRYREAA*IIKKGK 692
            L+ NGSGA  S P+S+FFGTSLKK V+SR+P SKV + SFKI A   E++E++QT KDRWKGLAYD SDDQQDITRGKG VD LFQAPM  GTHYAVMSSY+Y+S GLR   LDN  DG YIAPAF+DKLVVHITKNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMM+A ++      E PAKL RQRYREAA +I KGK
Sbjct:   16 LNLNGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAADLIAKGK 223          
BLAST of EY680150 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 1.564e-79
Identity = 158/227 (69.60%), Postives = 178/227 (78.41%), Query Frame = 3
Query:   54 MAAAV---------PLSFNGSGA-ATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMNARKIGKWQCLEKPAKLNRQRYREAA*IIKKGKRGCL 704
            MAAAV         PLS NGSG+ A S P+S+F G  +  VS     +K  + SFK+ A V E+KQT  DRW+GLAYD SDDQQDITRGKG VDS+FQAPMGTGTH+AV+SSY+Y+SQGLR YNLDN MDG YIAPAFMDKLVVHITKNF++LPNIKVPLILGIWGGKGQGKSFQCELV AKMGINPIMM+A ++      E PAKL RQRYREAA +IKKGK  CL
Sbjct:    1 MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA-VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAADLIKKGKMCCL 225          
BLAST of EY680150 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 1.014e-78
Identity = 153/216 (70.83%), Postives = 170/216 (78.70%), Query Frame = 3
Query:   69 PLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMNARKIGKWQCLEKPAKLNRQRYREAA*IIKKGKRGCL 704
            PLS N S A TSVPS++FFG +LKKV  + +   KV + S +I AE   VD  KQT  DRWKGL  D SDDQQDITRGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+ LPNIKVPLILGIWGGKGQGKSFQCELVF KMGINPIMM+A ++      E PAKL RQRYREAA II+KG   CL
Sbjct:   15 PLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAAEIIRKGNMCCL 229          
BLAST of EY680150 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.464e-77
Identity = 149/219 (68.04%), Postives = 171/219 (78.08%), Query Frame = 3
Query:   48 SLMAAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMNARKIGKWQCLEKPAKLNRQRYREAA*IIKKGKRGCL 704
            S + A    + N S     VP+S+F G+ LK VSSR   SK+ + +FKI AE DE KQT+KD+W+GLA+D SDDQQDITRGKG  D LFQAPMGTGTH AV+SSY+YIS GLR Y+ DN +DG YIAPAFMDKL VHI KNF++LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMM+A ++      E PAKL RQRYREAA IIKKGK  CL
Sbjct:    6 STIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAADIIKKGKMCCL 222          
BLAST of EY680150 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.912e-77
Identity = 150/220 (68.18%), Postives = 170/220 (77.27%), Query Frame = 3
Query:   57 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMNARKIGKWQCLEKPAKLNRQRYREAA*IIKKGKRGCL 704
            A   PLS N S A TSVPS++FFG +LKKV  + +   KV + S +I AE    D  KQT  DRWKGL  D SDDQQDI RGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YN+DNT+DG YIAP+FMDKLVVHITKNF+ LPNIKVPLILG+WGGKGQGKSFQCELVF KMGINPIMM+A ++      E PAKL RQRYREAA II+KG   CL
Sbjct:   11 ANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAAEIIRKGNICCL 229          
BLAST of EY680150 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.709e-76
Identity = 148/218 (67.89%), Postives = 174/218 (79.82%), Query Frame = 3
Query:   57 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITA-EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMNARKIGKWQCLEKPAKLNRQRYREAA*IIKKGKRGCL 704
            A+  PLS N S A TSVPS++FFG SLKKV ++ +   KV + + ++ A EVDE   TK+DRWKGL  + SDDQQDI RGKG VDSLFQAP GTGTH+A+M+SY+Y+SQ L+TY LDN +DG YIAPAFMDKLVVHITKNF++LPNIKVPLILG+WGGKGQGKSFQCELVF KMGINPIMM+A ++      E PAKL RQRYREAA II+KG   CL
Sbjct:   11 ASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVAQEVDE---TKEDRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGE-PAKLIRQRYREAAEIIRKGNMCCL 224          
The following BLAST results are available for this feature:
BLAST of EY680150 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
RCA2_LARTR9.466e-8576.17Ribulose bisphosphate carboxylase/oxygenase activa... [more]
RCA1_LARTR9.466e-8576.17Ribulose bisphosphate carboxylase/oxygenase activa... [more]
RCA_MALDO3.045e-8374.52Ribulose bisphosphate carboxylase/oxygenase activa... [more]
RCA_PHAVU1.083e-8072.99Ribulose bisphosphate carboxylase/oxygenase activa... [more]
RCA_PHAAU1.415e-8074.41Ribulose bisphosphate carboxylase/oxygenase activa... [more]
RCA_ARATH1.564e-7969.60Ribulose bisphosphate carboxylase/oxygenase activa... [more]
RCA1_TOBAC1.014e-7870.83Ribulose bisphosphate carboxylase/oxygenase activa... [more]
RCA_CUCSA1.464e-7768.04Ribulose bisphosphate carboxylase/oxygenase activa... [more]
RCA2_TOBAC1.912e-7768.18Ribulose bisphosphate carboxylase/oxygenase activa... [more]
RCA_SOLPN4.709e-7667.89Ribulose bisphosphate carboxylase/oxygenase activa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-H12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680150 ID=EY680150; Name=EY680150; organism=Citrus sinensis; type=EST; length=861bp
CAGCGTGACCCTTTAGCTACTTCAATCACAGCCGTCCAATTCTCGCTAGC
CTAATGGCTGCTGCTGTACCGTTGAGCTTCAATGGCTCTGGTGCTGCAAC
CTCTGTCCCAAGCTCATCTTTCTTTGGCACCAGCTTGAAGAAGGTAAGCT
CAAGGATCCCCCCATCCAAGGTCCCTTCTGCGAGCTTCAAGATTACTGCT
GAAGTCGATGAGAACAAGCAGACCAAGAAGGACAGATGGAAGGGCCTTGC
CTACGACGAATCTGATGACCAGCAAGACATCACCAGAGGAAAAGGTGCTG
TGGACTCTCTGTTCCAAGCCCCCATGGGAACCGGAACTCACTATGCTGTC
ATGAGTTCTTATGACTACATCAGCCAAGGTCTCCGCACATACAACTTGGA
CAACACGATGGACGGTCTCTACATTGCCCCTGCTTTCATGGACAAGCTTG
TTGTTCACATCACCAAGAACTTCATGTCCCTGCCCAACATCAAGGTTCCT
CTCATCTTGGGTATATGGGGAGGCAAAGGGCAAGGAAAATCATTCCAATG
TGAGCTTGTTTTCGCCAAGATGGGCATCAACCCAATTATGATGAATGCCC
GGAAAATTGGAAAGTGGCAATGCCTGGAAAAACCCGCTAAGTTGAATAGG
CAAAGGTACCGTGAAGCAGCCTAAATTATCAAAAAGGGAAAAAGGGGCTG
CCTCCATGATAAATAATCTTGAGGCAGAAACTGGTCCTAATGGGGGGCAC
CCCCCCCTTTAACACGTTTAACACCCAAAATGGGTAAACCCCACCCTCCG
TAAACTTTTGCTGAAAACCCACAATTTTGTTTCCAATCTCCCCTGTATAG
TGAAAAAAAAA
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