EY730840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY730840 vs. ExPASy Swiss-Prot
Match: RH53_ARATH (DEAD-box ATP-dependent RNA helicase 53 OS=Arabidopsis thaliana GN=RH53 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.180e-22 Identity = 53/78 (67.95%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 256 IPAVSLSSFSYF*ASIF--VS*EHAKGGKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFN 483 I S+ + SY ASI + EHAKGGKCIVFTQTKRDADRL++A+A+S+ CE LHGDISQSQRERTL+ FRDG FN Sbjct: 323 ITTYSIIADSYGRASIIGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFN 400
BLAST of EY730840 vs. ExPASy Swiss-Prot
Match: RH53_ORYSJ (DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp. japonica GN=Os07g0143700 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 3.108e-21 Identity = 46/56 (82.14%), Postives = 51/56 (91.07%), Query Frame = 1 Query: 316 EHAKGGKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFN 483 EHA GGKCIVFTQTKR+ADRLA+AM +SY C+ LHGDISQ+QRERTLS FRDGRFN Sbjct: 324 EHANGGKCIVFTQTKREADRLAYAMGRSYACQALHGDISQNQRERTLSGFRDGRFN 379
BLAST of EY730840 vs. ExPASy Swiss-Prot
Match: RH9_ARATH (DEAD-box ATP-dependent RNA helicase 9 OS=Arabidopsis thaliana GN=RH9 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.302e-21 Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 256 IPAVSLSSFSYF*ASIF--VS*EHAKGGKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFN 483 I S+++ SY ASI + EH KGGKCIVFTQTKRDADRLA +AKSY CE LHGDISQ+QRERTL+ FRDG F+ Sbjct: 335 ITMYSIAADSYGRASIIGPLVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFS 412
BLAST of EY730840 vs. ExPASy Swiss-Prot
Match: RH9_ORYSJ (DEAD-box ATP-dependent RNA helicase 9 OS=Oryza sativa subsp. japonica GN=Os12g0611200 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.228e-19 Identity = 41/56 (73.21%), Postives = 49/56 (87.50%), Query Frame = 1 Query: 316 EHAKGGKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRFN 483 EHAKGGKCIVFTQTKRDADRL++ M +S+ C+ LHGDI+Q+QRERTL FR+G FN Sbjct: 338 EHAKGGKCIVFTQTKRDADRLSYTMGRSFQCQALHGDITQAQRERTLKGFREGHFN 393
BLAST of EY730840 vs. ExPASy Swiss-Prot
Match: RH3_ARATH (DEAD-box ATP-dependent RNA helicase 3 OS=Arabidopsis thaliana GN=RH3 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 37/54 (68.52%), Postives = 44/54 (81.48%), Query Frame = 1 Query: 319 HAKGGKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRF 480 +AKGGK IVFTQTKRDAD ++ A++ S E LHGDISQ QRERTL+AFR G+F Sbjct: 348 YAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKF 401
BLAST of EY730840 vs. ExPASy Swiss-Prot
Match: RH3_ORYSJ (DEAD-box ATP-dependent RNA helicase 3 OS=Oryza sativa subsp. japonica GN=Os03g0827700 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 1 Query: 319 HAKGGKCIVFTQTKRDADRLAHAMAKSYNCEPLHGDISQSQRERTLSAFRDGRF 480 +AKGGK IVFT+TKRDAD ++ A+ S E LHGDISQ QRERTL+ FR G+F Sbjct: 348 YAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKF 401 The following BLAST results are available for this feature:
BLAST of EY730840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY730840 ID=EY730840; Name=EY730840; organism=Citrus sinensis; type=EST; length=483bpback to top |