EY730828
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY730828 vs. ExPASy Swiss-Prot
Match: BUGT_BORPE (Protein bugT OS=Bordetella pertussis GN=bugT PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.170e-19 Identity = 54/133 (40.60%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 79 HLAGVMFDQLTGAGMQHIPYKGSAQALNDLLGGHLPIMFDNLPASLPHIKSGKVHALAVTGSKRAPALPDVPTLAELGYGGAVVDPWFAVYGPAKLPPEITXXXXXXXXXXXXMPDVKDKLEQAGFMPYGSTP 477 HL +F TGA + IPYKGS A+ DLLGG + +N+PA L HI+SG + ALA+ S R+ P VPT+AELGY V PWFAV P P+I V + G P +TP Sbjct: 168 HLLTELFQLRTGAAINMIPYKGSGPAVVDLLGGVVAADIENMPAVLEHIRSGNLRALAILSSDRSTHFPAVPTMAELGYPEFVASPWFAVMAPKGTDPKIIVLLNRHINEALQSKAVVEAFAAQGATPVIATP 300
BLAST of EY730828 vs. ExPASy Swiss-Prot
Match: YTCB_PSESQ (UPF0065 protein in tcbD-tcbE intergenic region OS=Pseudomonas sp. (strain P51) PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.420e-18 Identity = 51/162 (31.48%), Postives = 83/162 (51.23%), Query Frame = 1 Query: 73 SMHLAGVMFDQLTGAGMQHIPYKGSAQALNDLLGGHLPIMFDNLPASLPHIKSGKVHALAVTGSKRAPALPDVPTLAE-LGYGGAVVDPWFAVYGPAKLPPEITXXXXXXXXXXXXMPDVKDKLEQAGFMPYGSTPAEVERLTRSQYESFKALSQKVKLSAD 555 S+HLA + + H+PY+GS+ A++DL+ G + +M D++ + +I + +V AL VT R P LP+VPT+AE G G V W V+ P P + PDV + L+Q G G P + L +S+ E ++ L + +L+A+ Sbjct: 174 SIHLASALLAARANVELLHVPYRGSSPAVSDLVAGRVDMMIDSVTSQRQNILAKRVRALGVTSLDRHPQLPEVPTIAEAAGLPGFEVLTWCGVFAPKGTPRSVVERLNAEINKAIAAPDVVEALKQLGIKTAGGAPEVLADLFKSETERWQKLIVEYRLNAN 335
BLAST of EY730828 vs. ExPASy Swiss-Prot
Match: YCLC_PSEPU (UPF0065 protein in clcB-clcD intergenic region OS=Pseudomonas putida PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.581e-16 Identity = 52/158 (32.91%), Postives = 75/158 (47.47%), Query Frame = 1 Query: 7 KDLVAYAKQHXXXXXXXXXXXX-SMHLAGVMFDQLTGAGMQHIPYKGSAQALNDLLGGHLPIMFDNLPASLPHIKSGKVHALAVTGSKRAPALPDVPTLAELG-YGGAVVDPWFAVYGPAKLPPEITXXXXXXXXXXXXMPDVKDKLEQAGFMPYGST 474 + L+AYAK + S+HLA + G + H+PYKGS A DL+ G L +M D++ A IKSG+V AL VT + AP+LP +P LA+ V WF ++ P++ P+I P+V+ L G G T Sbjct: 143 RSLLAYAKANPGKVSFASAGMGTSIHLAAALLAAQAGVDLLHVPYKGSTPAAADLIAGRLSMMVDSITAQQSFIKSGRVRALGVTSLQPAPSLPGIPPLAQAADQPNFEVLTWFGLFVPSRTSPDIVKVLNTAMNEALKTPEVQKALADIGASAQGGT 300
BLAST of EY730828 vs. ExPASy Swiss-Prot
Match: YCLC_PSESB (UPF0065 protein in clcB-clcD intergenic region (Fragment) OS=Pseudomonas sp. (strain B13) PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.523e-16 Identity = 47/135 (34.81%), Postives = 67/135 (49.63%), Query Frame = 1 Query: 73 SMHLAGVMFDQLTGAGMQHIPYKGSAQALNDLLGGHLPIMFDNLPASLPHIKSGKVHALAVTGSKRAPALPDVPTLAELG-YGGAVVDPWFAVYGPAKLPPEITXXXXXXXXXXXXMPDVKDKLEQAGFMPYGST 474 S+HLA + G + H+PYKGS A DL+ G L +M D++ A IKSG+V AL VT + AP+LP +P LA+ V WF ++ P++ P+I P+V+ L G G T Sbjct: 6 SIHLAAALLAAQAGVDLLHVPYKGSTPAAADLIAGRLSMMVDSITAQQSFIKSGRVRALGVTSLQPAPSLPGIPPLAQAADQPNFEVLTWFGLFVPSRTSPDIVKVLNTAMNEALKTPEVQKALADIGASAQGGT 140
BLAST of EY730828 vs. ExPASy Swiss-Prot
Match: YGB7_RALEU (UPF0065 protein in gbd 5'region OS=Ralstonia eutropha PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.283e-15 Identity = 51/184 (27.72%), Postives = 85/184 (46.20%), Query Frame = 1 Query: 1 SVKDLVAYAKQHXXXXXXXXXXXXS-MHLAGVMFDQLTGAGMQHIPYKGSAQALNDLLGGHLPIMFDNLPASLPHIKSGKVHALAVTGSKRAPALPDVPTLAELGYGGAVVDPWFAVYGPAKLPPEITXXXXXXXXXXXXMPDVKDKLEQAGFMPYGSTPAEVERLTRSQYESFKALSQKVKLS 549 ++++ +AYAK + + +HL G HIPYKG+++++ LLGGH+ + D PA P+++ GK+ L+ G KR+ P VPTL ELG G P F + P P+I MP+ ++ L + PY + + + KA+ +K+ L+ Sbjct: 143 TMQEYIAYAKANPGKLTYGSPGSMTTLHLTMEELAMKQGVQFSHIPYKGNSESMQALLGGHVMSVADT-PAWAPYVEQGKLRLLSTWGEKRSARFPSVPTLKELGIGIVQTSP-FGLVAPKGTDPKIVQKLHDAFKKAMDMPNYRESLAKFDMEPYYMNSQQYAQFAAETVKKEKAIIEKLGLA 324
BLAST of EY730828 vs. ExPASy Swiss-Prot
Match: YTUY_AGRVI (UPF0065 protein in the TAR-I ttuE-ttuC' intergenic region OS=Agrobacterium vitis PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.218e-13 Identity = 51/183 (27.87%), Postives = 81/183 (44.26%), Query Frame = 1 Query: 10 DLVAYAKQHXXXXXXXXXXXXSMH-LAGVMFDQLTGAGMQHIPYKGSAQALNDLLGGHLPIMFDNLPASLPHIKSGKVHALAVTGSKRAPALPDVPTLAELGYGGAVVDPWFAVYGPAKLPPEITXXXXXXXXXXXXMPDVKDKLEQAGFMPYG---STPAEVERLTRSQYESF-KALSQKVK 543 DLVA K++ ++ L G + G + +PYKG A+ DL+GG + + D + IK+ +VHA AVT R LPDVPT+ E G + W A++ P P I P V ++ G +P +TPA +++ +++ E K +S+ K Sbjct: 164 DLVAIVKKNATTVTFGTAGTGAVSDLCGRLLQDALGTKITLVPYKGMGPAMTDLIGGRIDLACDQTTNTTTQIKANEVHAYAVTTKARIDVLPDVPTVDEGGLKDFELSAWHALWAPKDTPAPIREKLSEALKTALKDPMVIERFASLGTVPVAQDMATPAALDQKFKAEVERLAKVISEAGK 346
BLAST of EY730828 vs. ExPASy Swiss-Prot
Match: Y4329_BORBR (UPF0065 protein BB4329 OS=Bordetella bronchiseptica GN=BB4329 PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.612e-11 Identity = 52/187 (27.81%), Postives = 78/187 (41.71%), Query Frame = 1 Query: 1 SVKDLVAYAKQHXXXXXXXXXXXXSMHLAGVMFDQLTGAGMQHIPYKGSAQALNDLLGGHLPIMFDNLPASLPHIKSGKVHALAVTGSKRAPALPDVPTLAELGYGGAVVDPWFAVYGPAKLPPEITXXXXXXXXXXXXMPDVKDKLEQAGFMPYGSTPAEVER-----LTRSQYESFKALSQKVKL 546 ++++LVA AK S L G +Q G + +I Y S A D++GG +PI+ D L PH KSG++ LAV+ + R PDVP+++E G V PA P E+ P + + F+P G A+ R + R Q F+ L Q + Sbjct: 154 NIQELVAGAKTDEVFFATPGAASLS-RLIGESINQKAGTRLVNIAYPSSPPAHTDIIGGQVPILIDGLGGIAPHAKSGRMRLLAVSTASRFAGFPDVPSISE-AVPGLATPSMNIVMAPAGTPAEVLDLLNRHINEITADPAIASR-----FIPMGGESAQGSRQDTAAMLREQRVEFRKLMQTANI 333 The following BLAST results are available for this feature:
BLAST of EY730828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY730828 ID=EY730828; Name=EY730828; organism=Citrus sinensis; type=EST; length=579bpback to top |