CX043857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043857 vs. ExPASy Swiss-Prot
Match: LEUC_ARATH (3-isopropylmalate dehydratase OS=Arabidopsis thaliana GN=IIL1 PE=2 SV=1) HSP 1 Score: 370.548 bits (950), Expect = 5.589e-102 Identity = 174/231 (75.32%), Postives = 202/231 (87.45%), Query Frame = 1 Query: 88 SSVISPAPTSSFINNKKDLGSFCFSSTSQFSVNKCKKLAVSKKIVSVMAPQQSERRPATTGSVKNAMTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDASFILGTGKVLL 780 +SVIS +P ++K DLG F +SQ S+++C+K ++S+KIVSVMAPQ+ +R P TTGSVK MT+TEKI ARASEK + PGDN+WVNVD+LMTHDVCGPG+FGIFK+EFGE AKVWD EKIV+IPDHYIFT+D+RANRNVDI+R+ C EQNIKYFYDI DLGNFKANPDYKGVCH+ALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDA F+LGTGK+LL Sbjct: 2 ASVISSSPFLCKSSSKSDLGISSFPKSSQISIHRCQKKSISRKIVSVMAPQK-DRSPGTTGSVKTGMTMTEKILARASEKSLVVPGDNIWVNVDVLMTHDVCGPGAFGIFKREFGEKAKVWDPEKIVVIPDHYIFTADKRANRNVDIMREHCREQNIKYFYDITDLGNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKILL 231
BLAST of CX043857 vs. ExPASy Swiss-Prot
Match: LEUC_METJA (Isopropylmalate/citramalate isomerase large subunit OS=Methanocaldococcus jannaschii GN=leuC PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.691e-37 Identity = 80/163 (49.08%), Postives = 105/163 (64.42%), Query Frame = 1 Query: 286 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDASFILGTGKV 774 MT+ EKI A+AS K ++SPGD V N+D+ M HD+ GP + K E+G KVW+ EKIVI+ DH + +A N ++R F EQ IKYFYDI++ GVCH L ++GH PGEV++G DSHTCT GAFG FATGIG+TD + + TGK+ Sbjct: 3 MTIVEKILAKASGKKEVSPGDIVMANIDVAMVHDITGPLTVNTLK-EYGIE-KVWNPEKIVILFDHQVPADSIKAAENHILMRKFVKEQGIKYFYDIRE-----------GVCHQVLPEKGHVAPGEVVVGADSHTCTHGAFGAFATGIGSTDMAHVFATGKL 152
BLAST of CX043857 vs. ExPASy Swiss-Prot
Match: LEUC1_METTH (3-isopropylmalate dehydratase large subunit 1 OS=Methanobacterium thermoautotrophicum GN=leuC1 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.454e-35 Identity = 78/164 (47.56%), Postives = 107/164 (65.24%), Query Frame = 1 Query: 283 AMTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDASFILGTGKV 774 +MT++EKI ARAS K ++ G+ V ++D+ MTHD+ GP S F+ GE+ +VWD EKIV+I DH + A +N I+RDF EQ I+ FYD+++ GVCH L ++GH PGEV++GTDSHTCT GA G FATGIG+TD + + TGK+ Sbjct: 2 SMTVSEKILARASGKDRVEAGEIVMADIDVAMTHDLTGPLSVESFRA-IGED-RVWDPEKIVVIFDHQVPADSIEAAQNHMIMRDFVEEQGIRNFYDVRE-----------GVCHQVLPEKGHVVPGEVVVGTDSHTCTHGALGAFATGIGSTDMAMVFATGKL 152
BLAST of CX043857 vs. ExPASy Swiss-Prot
Match: LEUC1_METKA (3-isopropylmalate dehydratase large subunit 1 OS=Methanopyrus kandleri GN=leuC1 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.562e-30 Identity = 69/162 (42.59%), Postives = 97/162 (59.88%), Query Frame = 1 Query: 289 TLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDASFILGTGKV 774 T+ EKI +RAS + GD V N+D+ M HD+ GP + + E +VWD KIV++ DH + A N I+R+F EQ I++FYD+++ GVCH L ++GH RPG+V++G DSHTCT GA G FATGIG+TD + + TGK+ Sbjct: 4 TMAEKILSRASGE-DAEAGDIVVANIDVAMVHDITGP--ITVQRLEEMGVERVWDPSKIVVLFDHQVPADSVEAAENHKIMREFVEEQGIEHFYDVRE-----------GVCHQVLPEKGHVRPGDVIVGADSHTCTHGALGAFATGIGSTDMAAVFATGKL 151
BLAST of CX043857 vs. ExPASy Swiss-Prot
Match: LEUC2_METMA (3-isopropylmalate dehydratase large subunit 2 OS=Methanosarcina mazei GN=leuC2 PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 3.346e-30 Identity = 73/167 (43.71%), Postives = 103/167 (61.68%), Query Frame = 1 Query: 286 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDASFILGTGKV 774 MT++EKIF++AS P + GD V N+D+ MTHD+ GP G + I + E E+ KVWD KIVII DH + A +N +LR F EQ I YD+ Y+GVCH L ++GH +PG++++G+DSHTC G+ G F+TGIG+TD + + TGK+ Sbjct: 1 MTVSEKIFSKASGTP-VKAGDFVLANIDLAMTHDITGPLAVQGFYEIMRDE--EDKKVWDPSKIVIIFDHQVPADSINAAQNHIMLRKFAKEQGILN-YDV-----------YEGVCHQVLPEKGHVKPGDLIVGSDSHTCAYGSLGAFSTGIGSTDMAAVFATGKL 152
BLAST of CX043857 vs. ExPASy Swiss-Prot
Match: LEUC2_METAC (3-isopropylmalate dehydratase large subunit 2 OS=Methanosarcina acetivorans GN=leuC2 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.660e-29 Identity = 73/167 (43.71%), Postives = 100/167 (59.88%), Query Frame = 1 Query: 286 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGP----GSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDASFILGTGKV 774 MT++EKIF++AS P + GD V N+D+ MTHD+ GP G + I + E E KVWD KIVII DH + A N +LR F EQ I YD+ Y+GVCH L ++GH PG++++G+DSHTC G+ G F+TGIG+TD + + TGK+ Sbjct: 1 MTVSEKIFSKASGTP-VKAGDFVLANIDLAMTHDITGPLAVQGFYEIMRDE--EEKKVWDPSKIVIIFDHQVPADSINAAENHIMLRKFAKEQGILN-YDV-----------YEGVCHQVLPEKGHVLPGDLIVGSDSHTCAYGSLGAFSTGIGSTDMAAVFATGKL 152
BLAST of CX043857 vs. ExPASy Swiss-Prot
Match: LEUC_SYNAS (3-isopropylmalate dehydratase large subunit OS=Syntrophus aciditrophicus (strain SB) GN=leuC PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.462e-27 Identity = 64/163 (39.26%), Postives = 99/163 (60.74%), Query Frame = 1 Query: 286 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDASFILGTGKV 774 MT+TEKI R ++ ++ PG + VDI + +DV P + F+K G+ KV+DR+K+V+IPDH+ D + I+RDF EQ I ++Y++ ++G V H L ++G PG++++G DSHTCT GA G FATG+G+TD + + TG+V Sbjct: 3 MTITEKILCRHTDLDEVRPGMLINAKVDIALGNDVTAPLAIDEFRKAGGK--KVFDRDKVVLIPDHFTPNKDINSAAQCKIMRDFAREQEITHYYEVGEVG----------VEHALLPEKGIVLPGDLVIGADSHTCTYGALGAFATGVGSTDLAAAMLTGEV 153
BLAST of CX043857 vs. ExPASy Swiss-Prot
Match: LEUC1_ARCFU (3-isopropylmalate dehydratase large subunit 1 OS=Archaeoglobus fulgidus GN=leuC1 PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27 Identity = 66/164 (40.24%), Postives = 93/164 (56.71%), Query Frame = 1 Query: 283 AMTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDASFILGTGKV 774 A TL EKIF++AS K ++ G+ V N+D+ M HD+ P + F++ G +AKVWD+ K+++ DH + A N +LR F EQ I YD+K G+ H + E H PG +++G DSHTC GA G FATGIG+TD F+L GK+ Sbjct: 2 AQTLVEKIFSKASGK-EVKAGEFVMANIDLAMIHDITAPLAIKAFREILGSDAKVWDKSKVIMAFDHQVPADSVHAAENHKMLRKFAEEQGILN-YDVKG-----------GIAHQIMV-ENHVEPGMLIVGADSHTCMYGALGAFATGIGSTDMGFVLAMGKL 151
BLAST of CX043857 vs. ExPASy Swiss-Prot
Match: LEUC_DESAA (3-isopropylmalate dehydratase large subunit OS=Desulfatibacillum alkenivorans (strain AK-01) GN=leuC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.828e-26 Identity = 61/165 (36.97%), Postives = 99/165 (60.00%), Query Frame = 1 Query: 286 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDASFILGTGKVLL 780 MT+ EKI A + + + SPGD + VDI + +D+ P + +F++ AKV+D++++V++PDH+ T D + V ++RDF EQ + ++Y+ D GV H L ++G PG++++G DSHTCT G G FATG+G+TD + + TG+V L Sbjct: 3 MTIAEKILAAHAGQEEASPGDLINAKVDIALGNDITAPIAIKLFRQSGA--AKVFDKDRVVLVPDHFTPTKDINSAMQVKMVRDFAREQELSHWYEGGD----------SGVEHALLPEKGIVGPGDLVIGADSHTCTYGGLGAFATGVGSTDLAAAMITGEVWL 155
BLAST of CX043857 vs. ExPASy Swiss-Prot
Match: LEUC_THEYD (3-isopropylmalate dehydratase large subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=leuC PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.900e-25 Identity = 59/162 (36.42%), Postives = 99/162 (61.11%), Query Frame = 1 Query: 286 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDASFILGTGK 771 MT+ EKI A + K +++PG+ + VDI++ +D+ P + F+K ++ V+DRE+I ++PDH+ D +A +LR+F + IK++++I +G + H L +EG PG++++G DSHTCT GA G FATG+G+TDA+ + TG+ Sbjct: 3 MTIAEKILAAHAGKKEVTPGEIINAKVDIVLANDITAPIAIKEFEKLGVKD--VFDRERIALVPDHFTPQKDIKAAEQCKMLREFAQKYKIKHYFEIGRVG----------IEHALLPEEGIVLPGDLVIGADSHTCTYGALGAFATGVGSTDAAIAMATGE 152 The following BLAST results are available for this feature:
BLAST of CX043857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043857 ID=CX043857; Name=CX043857; organism=Citrus sinensis; type=EST; length=780bpback to top |