CX300789

Overview
NameCX300789
Unique NameCX300789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10660 contig Csv1_Contig10660:17..428. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX300789 vs. ExPASy Swiss-Prot
Match: EOMT1_OCIBA (Eugenol O-methyltransferase OS=Ocimum basilicum GN=EOMT1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.457e-22
Identity = 56/119 (47.06%), Postives = 75/119 (63.03%), Query Frame = 2
Query:   41 LGAKELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFRLMRLLVHSGCF-NKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFLDPCF 394
            L  ++L Q Q  ++  M+   +SMSLKCAI+LGI DI+H HGR +TLS+L+ ++ I   KT    RLMR LV+S  F  +   N QE  Y LT AS LL+K+ P  ++P V V LDP F
Sbjct:   10 LSTEQLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQSIPINKEKTQCFQRLMRALVNSNFFIEENNSNNQEVCYWLTPASCLLLKEAPLTVTPLVQVVLDPTF 128          
BLAST of CX300789 vs. ExPASy Swiss-Prot
Match: CVMT1_OCIBA (Chavicol O-methyltransferase OS=Ocimum basilicum GN=CVOMT1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.902e-22
Identity = 55/118 (46.61%), Postives = 73/118 (61.86%), Query Frame = 2
Query:   41 LGAKELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFRLMRLLVHSGCFNKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFLDPCF 394
            L  ++L Q QA ++  M+   +SMSLKCAI+LGI DI+H H   +TLS+L+ A+ I   K+    RLMR LV+S  F +   N QE  Y LT AS LL+K  P  ++P V V LDP F
Sbjct:   10 LSTEQLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQLLKAIPINKEKSQSFQRLMRALVNSNFFIEENSNNQEVCYWLTPASRLLLKGAPLTVAPLVQVVLDPTF 127          
BLAST of CX300789 vs. ExPASy Swiss-Prot
Match: 7OMT9_MEDSA (Isoflavone-7-O-methyltransferase 9 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.780e-20
Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 2
Query:   53 ELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFRLMRLLVHSGCFNKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFLDPCFVAAF 406
            E+F+ QA LYK ++  + SMSLK A+ + I +IIH+HG+ I+LS LVS L +  +K   + RLMR L H+G F    +  +EE+Y LT AS LL++    CL+P V   LDP    ++
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFE--IITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSY 127          
BLAST of CX300789 vs. ExPASy Swiss-Prot
Match: 7OMT8_MEDSA (Isoflavone-7-O-methyltransferase 8 OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.325e-20
Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 2
Query:   53 ELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFRLMRLLVHSGCFNKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFLDPCFVAAF 406
            E+F+ QA LYK ++  + SMSLK A+E+ I +II +HG+ I+LS LVS L +  +K   + RLMR L H+G F    +  +EE+Y LT AS LL++    CL+P V   LDP    ++
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFE--IITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSY 127          
BLAST of CX300789 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.325e-20
Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 2
Query:   53 ELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFRLMRLLVHSGCFNKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFLDPCFVAAF 406
            E+F+ QA LYK ++  + SMSLK A+E+ I +II +HG+ I+LS LVS L +  +K   + RLMR L H+G F    +  +EE+Y LT AS LL++    CL+P V   LDP    ++
Sbjct:   12 EIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFE--IITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSY 127          
BLAST of CX300789 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.538e-16
Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = 2
Query:   50 KELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFRLMRLLVHSGCFNKTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFLDPCFVA 400
            K+    QA+L+  ++    S+ LKCA++L +A+IIH+ G ++TLSEL S L  QP     L+R+MR LVH   F K  ++G E  YGL   +  L+K    C+  ++    D  F+A
Sbjct:    5 KDNLSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNEDALYRVMRYLVHMKLFTKASIDG-ELRYGLAPPAKYLVKGWDKCMVGSILAITDKDFMA 120          
BLAST of CX300789 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.614e-13
Identity = 45/126 (35.71%), Postives = 67/126 (53.17%), Query Frame = 2
Query:   50 KELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFRLMRLLVHSGCFNKTKVNG-----QEEAYGLTAASTLLI--KDKPYCLSPTVSVFLDPCFVAAF 406
            + L   Q +L+   F  + SM+LK AI L IAD IH HG A +LS+++S + + P++ + L RLMR+L  +  F    + G      E  Y LT  S LLI  +      +P  ++ LDP  V+ F
Sbjct:   11 QSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRVSSLRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIGSQSSQLAQTPLAAMVLDPTIVSPF 136          
BLAST of CX300789 vs. ExPASy Swiss-Prot
Match: COOMT_COPJA (Columbamine O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.498e-11
Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = 2
Query:   23 MDANQDLGAKELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFRLMRLLVHSGCFN-KTKVNGQEEAYGLTAASTLLIKDKPYCLSPTVSVFLDP 388
            MD        +  + QAQ++K MF    ++ L+  + LGI DIIH++G  +TLS+LV+ L ++ T        MR LVH   F   T    +E+ Y LT AS LL+      L+P V +   P
Sbjct:    1 MDTPNTFQNDDEIKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHNNG-PVTLSQLVTHLPLKSTSIDRFHHFMRYLVHMQLFTISTDQITKEDKYELTPASKLLVHGHQKSLAPYVMLQTHP 122          
The following BLAST results are available for this feature:
BLAST of CX300789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
EOMT1_OCIBA1.457e-2247.06Eugenol O-methyltransferase OS=Ocimum basilicum GN... [more]
CVMT1_OCIBA1.902e-2246.61Chavicol O-methyltransferase OS=Ocimum basilicum G... [more]
7OMT9_MEDSA1.780e-2043.22Isoflavone-7-O-methyltransferase 9 OS=Medicago sat... [more]
7OMT8_MEDSA2.325e-2043.22Isoflavone-7-O-methyltransferase 8 OS=Medicago sat... [more]
7OMT6_MEDSA2.325e-2043.22Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]
6OMT_COPJA4.538e-1637.61(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
ZRP4_MAIZE1.614e-1335.71O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]
COOMT_COPJA7.498e-1134.96Columbamine O-methyltransferase OS=Coptis japonica... [more]
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Properties
Property NameValue
Genbank descriptionC08002C06SK PhyRootSw1 Citrus sinensis cDNA clone C08002C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300789 ID=CX300789; Name=CX300789; organism=Citrus sinensis; type=EST; length=412bp
ATTTAATTGATCATCAGTATCTATGGATGCGAATCAAGATCTAGGAGCAA
AAGAGTTGTTTCAAGGCCAAGCTCAACTGTATAAGCTCATGTTTAATCAT
TTAAGCTCGATGTCACTCAAGTGCGCGATTGAGCTAGGCATAGCGGATAT
AATTCACAGCCACGGACGGGCCATCACTCTTTCTGAGTTGGTCTCGGCAC
TTGATATTCAGCCTACAAAAACGACTGGTTTATTCAGGCTCATGCGCTTG
TTAGTTCACTCGGGCTGCTTTAACAAAACCAAAGTCAATGGACAAGAAGA
AGCATACGGGCTCACAGCTGCTTCTACTCTGCTCATCAAAGACAAGCCCT
ACTGTTTATCACCAACTGTTTCAGTATTTCTTGACCCATGTTTTGTCGCT
GCATTTCAGTCT
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