CX300787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300787 vs. ExPASy Swiss-Prot
Match: RL361_ARATH (60S ribosomal protein L36-1 OS=Arabidopsis thaliana GN=RPL36A PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.474e-22 Identity = 53/108 (49.07%), Postives = 73/108 (67.59%), Query Frame = 1 Query: 43 TNKMSTGIAVGLKKGFPVTKREKIARPSSHKGKISKRTKLVRELISEVVGLSPYEKRLLDMLKTGGASSEKRMYKYAKRRLGTHRRALKKRDQVKETYAKIRARAAMA 366 T + TG+ VGL KG VT+RE RP+S KGK SKRT +R+LI EV G++PYEKR+ ++LK G +KR K AKR+LGTH+RA +KR+++ K+R+ A Sbjct: 3 TPAVKTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVG---KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAA 107
BLAST of CX300787 vs. ExPASy Swiss-Prot
Match: RL363_ARATH (60S ribosomal protein L36-3 OS=Arabidopsis thaliana GN=RPL36C PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.514e-22 Identity = 53/105 (50.48%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 52 MSTGIAVGLKKGFPVTKREKIARPSSHKGKISKRTKLVRELISEVVGLSPYEKRLLDMLKTGGASSEKRMYKYAKRRLGTHRRALKKRDQVKETYAKIRARAAMA 366 ++TG+ VGL KG VTKRE+ RP++ KGK SKRT +R LI EV G +PYEKR+ ++LK G +KR K AKR+LGTH+RA +KR+++ K+R+ A A Sbjct: 2 VATGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG---KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGAGA 103
BLAST of CX300787 vs. ExPASy Swiss-Prot
Match: RL362_ARATH (60S ribosomal protein L36-2 OS=Arabidopsis thaliana GN=RPL36B PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.601e-22 Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 43 TNKMSTGIAVGLKKGFPVTKREKIARPSSHKGKISKRTKLVRELISEVVGLSPYEKRLLDMLKTGGASSEKRMYKYAKRRLGTHRRALKKRDQVKETYAKIRA 351 T ++ TG+ VGL KG VT+RE RP S KGK SKRT +R LI EV G +PYEKR+ ++LK G +KR K AKR+LGTH+RA +KR+++ K+R+ Sbjct: 3 TPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG---KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRS 102
BLAST of CX300787 vs. ExPASy Swiss-Prot
Match: RL36_IXOSC (60S ribosomal protein L36 OS=Ixodes scapularis GN=RpL36 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.757e-18 Identity = 47/99 (47.47%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 64 IAVGLKKGFPVTKREKIARPSSHKGKISKRTKLVRELISEVVGLSPYEKRLLDMLKTGGASSEKRMYKYAKRRLGTHRRALKKRDQVKETYAKIRARAA 360 +AVGL KG VTK E RPS KG +SK T+ VR+LI EV G +P+E+R +++LK S +KR K+ K+RLGTH R +KRD++ R AA Sbjct: 7 LAVGLGKGHKVTKNEYKPRPSRRKGALSKHTRFVRDLIREVCGFAPFERRAMELLK---VSKDKRALKFIKKRLGTHLRGKRKRDELSNVLVAQRKAAA 102
BLAST of CX300787 vs. ExPASy Swiss-Prot
Match: RL36_CAEEL (60S ribosomal protein L36 OS=Caenorhabditis elegans GN=rpl-36 PE=1 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 3.757e-18 Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 61 GIAVGLKKGFPVTKREKIARPSSHKGKISKRTKLVRELISEVVGLSPYEKRLLDMLKTGGASSEKRMYKYAKRRLGTHRRALKKRDQVK 327 G+AVGL KG T+ R + HKG SK+TK+VREL+ E+ G +PYE+R+L+ML+ S +KR K+ KRR+GTHRRA KR++++ Sbjct: 8 GLAVGLNKGHAATQLPVKQRQNRHKGVASKKTKIVRELVREITGFAPYERRVLEMLR---ISKDKRALKFLKRRIGTHRRAKGKREELQ 93
BLAST of CX300787 vs. ExPASy Swiss-Prot
Match: RL36_ENTCP (60S ribosomal protein L36 OS=Enteromorpha compressa GN=RL36 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.865e-17 Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 64 IAVGLKKGFPVTKREKIARPSSHKGKISKRTKLVRELISEVVGLSPYEKRLLDMLKTGGASSEKRMYKYAKRRLGTHRRALKKRDQVKETYAKIRA 351 IAVGL KG VTK+ RPS KG +S+R K VR ++ EV G +PYE+R++++LK G +KR K KR+LGTH R KKR+++ K++A Sbjct: 4 IAVGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVG---KDKRALKMCKRKLGTHMRGKKKREEMAGVLRKMQA 96
BLAST of CX300787 vs. ExPASy Swiss-Prot
Match: RL36_PONAB (60S ribosomal protein L36 OS=Pongo abelii GN=RPL36 PE=3 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 2.435e-17 Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = 1 Query: 64 IAVGLKKGFPVTKREKIARPSSHKGKISKRTKLVRELISEVVGLSPYEKRLLDMLKTGGASSEKRMYKYAKRRLGTHRRALKKRDQVKETYAKIRARAA 360 +AVGL KG VTK R S +G+++K TK VR++I EV G +PYE+R +++LK S +KR K+ K+R+GTH RA +KR+++ A +R AA Sbjct: 7 MAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLK---VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAAA 102
BLAST of CX300787 vs. ExPASy Swiss-Prot
Match: RL36_ICTPU (60S ribosomal protein L36 OS=Ictalurus punctatus GN=rpl36 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.435e-17 Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 64 IAVGLKKGFPVTKREKIARPSSHKGKISKRTKLVRELISEVVGLSPYEKRLLDMLKTGGASSEKRMYKYAKRRLGTHRRALKKRDQVKETYAKIRARAA 360 +AVGLKKG PVTK + S G+++K +K VR++I EV G +PYE+R +++LK S +KR K+ K+R+GTH RA +KR+++ A +R AA Sbjct: 7 MAVGLKKGHPVTKNVTKPKHSRRGGRLTKHSKFVRDMIREVCGFAPYERRAMELLK---VSKDKRALKFIKKRVGTHIRAKRKREELSNILAAMRKAAA 102
BLAST of CX300787 vs. ExPASy Swiss-Prot
Match: RL36_HUMAN (60S ribosomal protein L36 OS=Homo sapiens GN=RPL36 PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 2.435e-17 Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = 1 Query: 64 IAVGLKKGFPVTKREKIARPSSHKGKISKRTKLVRELISEVVGLSPYEKRLLDMLKTGGASSEKRMYKYAKRRLGTHRRALKKRDQVKETYAKIRARAA 360 +AVGL KG VTK R S +G+++K TK VR++I EV G +PYE+R +++LK S +KR K+ K+R+GTH RA +KR+++ A +R AA Sbjct: 7 MAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLK---VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAAA 102
BLAST of CX300787 vs. ExPASy Swiss-Prot
Match: RL36_CHICK (60S ribosomal protein L36 OS=Gallus gallus GN=RPL36 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.181e-17 Identity = 43/99 (43.43%), Postives = 65/99 (65.66%), Query Frame = 1 Query: 64 IAVGLKKGFPVTKREKIARPSSHKGKISKRTKLVRELISEVVGLSPYEKRLLDMLKTGGASSEKRMYKYAKRRLGTHRRALKKRDQVKETYAKIRARAA 360 +AVGL KG+ VTK R +G+++K TK VR++I EV G +PYE+R +++LK S +KR K+ K+R+GTH RA +KR+++ A +R AA Sbjct: 7 MAVGLNKGYKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLK---VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAAA 102 The following BLAST results are available for this feature:
BLAST of CX300787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300787 ID=CX300787; Name=CX300787; organism=Citrus sinensis; type=EST; length=404bpback to top |