EY679063

Overview
NameEY679063
Unique NameEY679063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679063 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 3.097e-50
Identity = 96/129 (74.42%), Postives = 110/129 (85.27%), Query Frame = 2
Query:   20 MASATLSVAKSALQGYGKGFS*FSGLRNSAS-LPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAK-LKVAINGFGKIGRNFLRCWNGRKDSPLEVVAINDTGGVKQASHLLKYDSNLGIFDADVK 400
            MASAT SVAK A++  GKGFS FSGLRNS+  LPF RKSSDDFHS++  QT+A+GSS    + +  +AK LKVAINGFG+IGRNFLRCW+GRKDSPL+V+AINDTGGVKQASHLLKYDS LGIFDADVK
Sbjct:    1 MASATFSVAKPAIKANGKGFSEFSGLRNSSRHLPFSRKSSDDFHSLVTFQTNAVGSSGGHKKSLVVEAKQLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVK 129          

HSP 2 Score: 30.0314 bits (66), Expect = 3.097e-50
Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  445 KVVSNHNPVNLPWGEL 492
            KVVS+ NP NLPW EL
Sbjct:  144 KVVSDRNPANLPWKEL 159          
BLAST of EY679063 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.616e-45
Identity = 84/117 (71.79%), Postives = 100/117 (85.47%), Query Frame = 2
Query:   50 SALQGYGKGFS*FSGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGKIGRNFLRCWNGRKDSPLEVVAINDTGGVKQASHLLKYDSNLGIFDADVK 400
            S+LQ   KGFS FSGLR S+++PFGRK++DD  SV+A QTS +G  +S  ++   +AKLKVAINGFG+IGRNFLRCW+GRKDSPL+V+AINDTGGVKQASHLLKYDS LGIFDADVK
Sbjct:    2 SSLQVSNKGFSEFSGLRTSSAIPFGRKTNDDLLSVVAFQTSVIGGGNS--KRGVVEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVK 116          

HSP 2 Score: 31.9574 bits (71), Expect = 1.616e-45
Identity = 12/16 (75.00%), Postives = 15/16 (93.75%), Query Frame = 1
Query:  445 KVVSNHNPVNLPWGEL 492
            +VVS+ NPVNLPWG+L
Sbjct:  131 QVVSDRNPVNLPWGDL 146          
BLAST of EY679063 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 2.105e-45
Identity = 89/128 (69.53%), Postives = 101/128 (78.91%), Query Frame = 2
Query:   20 MASATLSVAKSALQGYGKGFS*FSGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGKIGRNFLRCWNGRKDSPLEVVAINDTGGVKQASHLLKYDSNLGIFDADVKT 403
            MAS  LS+A  +L+ Y KGFS FSGL  S SLPFGRK SDD  + ++ QT+A+G   S    V  +AKLKVAINGFG+IGRNFLRCW+GRKDSPL+VV INDTGGVKQASHLLKYDS LG FDADVKT
Sbjct:    1 MASNMLSIANPSLRVYNKGFSEFSGLHTS-SLPFGRKGSDDLMAFVSFQTNAVGGKRSSQNGVV-EAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKT 126          

HSP 2 Score: 32.7278 bits (73), Expect = 2.105e-45
Identity = 12/16 (75.00%), Postives = 15/16 (93.75%), Query Frame = 1
Query:  445 KVVSNHNPVNLPWGEL 492
            KVVS+ NPVNLPWG++
Sbjct:  140 KVVSDRNPVNLPWGDM 155          
BLAST of EY679063 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 1.752e-44
Identity = 93/129 (72.09%), Postives = 107/129 (82.95%), Query Frame = 2
Query:   20 MASATLSVAKSALQGYGKGFS*FSGLRNS-ASLPFGRK-SSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGKIGRNFLRCWNGRKDSPLEVVAINDTGGVKQASHLLKYDSNLGIFDADVK 400
            MAS T SV K        GF+ FSGLR+S ASLPFG+K SSD+F S+++ QTSA+GSS  GYRK   +AKLKVAINGFG+IGRNFLRCW+GRKDSPL+++AINDTGGVKQASHLLKYDS LGIFDADVK
Sbjct:    1 MASVTFSVPK--------GFTEFSGLRSSSASLPFGKKLSSDEFVSIVSFQTSAMGSSG-GYRKGVTEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTGGVKQASHLLKYDSTLGIFDADVK 120          

HSP 2 Score: 26.1794 bits (56), Expect = 1.752e-44
Identity = 11/16 (68.75%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  445 KVVSNHNPVNLPWGEL 492
            +VVSN NP  LPW EL
Sbjct:  135 QVVSNRNPSLLPWKEL 150          
BLAST of EY679063 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.901e-41
Identity = 87/129 (67.44%), Postives = 101/129 (78.29%), Query Frame = 2
Query:   20 MASATLSVAKSALQGYGKGFS*FSGLRNSASLPFGRKS-SDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGKIGRNFLRCWNGRKD-SPLEVVAINDTGGVKQASHLLKYDSNLGIFDADVK 400
            MAS+ LS     LQ  G G S FSGLR+SASLP  R + SDDF S ++ +T A+G+S  G R+   +AKLKVAINGFG+IGRNFLRCW+GR D SPL+V+AINDTGGVKQASHLLKYDS LGIFDADVK
Sbjct:    1 MASSMLSATTVPLQ-QGGGLSEFSGLRSSASLPMRRNATSDDFMSAVSFRTHAVGTSG-GPRRAPTEAKLKVAINGFGRIGRNFLRCWHGRGDASPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVK 127          

HSP 2 Score: 32.3426 bits (72), Expect = 2.901e-41
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  445 KVVSNHNPVNLPWGEL 492
            KVVS+ NP NLPWGEL
Sbjct:  142 KVVSDRNPSNLPWGEL 157          
BLAST of EY679063 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.279e-31
Identity = 67/105 (63.81%), Postives = 81/105 (77.14%), Query Frame = 2
Query:   86 FSGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGKIGRNFLRCWNGRKDSPLEVVAINDTGGVKQASHLLKYDSNLGIFDADVK 400
            FSGLR+S S+ F R++S  FH VIA Q +   + ++  R     AKLKVAINGFG+IGRNFLRCW+GRKDSPL+VV +ND+GGVK A+HLLKYDS LG F ADVK
Sbjct:   42 FSGLRSSNSVTFTREAS--FHDVIAAQLTTKPTGAAPVRGETV-AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKSATHLLKYDSILGTFKADVK 143          

HSP 2 Score: 28.8758 bits (63), Expect = 1.279e-31
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  445 KVVSNHNPVNLPWGEL 492
            KVVSN +P+ LPW EL
Sbjct:  158 KVVSNRDPLKLPWAEL 173          
BLAST of EY679063 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 5.154e-30
Identity = 61/106 (57.55%), Postives = 81/106 (76.42%), Query Frame = 2
Query:   86 FSGLRNSASLPFGRKSSDD-FHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGKIGRNFLRCWNGRKDSPLEVVAINDTGGVKQASHLLKYDSNLGIFDADVK 400
            FSGL++++ + +   + D  F+ V+A Q ++  + S+  + V   AKLKVAINGFG+IGRNFLRCW+GRKDSPLEV+ +ND+GGVK ASHLLKYDS LG F A+VK
Sbjct:   40 FSGLKSTSCISYVHSARDSSFYDVVAAQLTSKANGSTAVKGVTV-AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSGGVKNASHLLKYDSMLGTFKAEVK 144          

HSP 2 Score: 26.9498 bits (58), Expect = 5.154e-30
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  445 KVVSNHNPVNLPWGEL 492
            KVVS+ +P+ LPW EL
Sbjct:  159 KVVSSRDPLKLPWAEL 174          
BLAST of EY679063 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.512e-29
Identity = 64/105 (60.95%), Postives = 77/105 (73.33%), Query Frame = 2
Query:   86 FSGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGKIGRNFLRCWNGRKDSPLEVVAINDTGGVKQASHLLKYDSNLGIFDADVK 400
            F+GLR+S  + F  K S  F  V++ Q +   + S+   K    AKLKVAINGFG+IGRNFLRCW+GRKDSPL+VV +ND+GGVK ASHLLKYDS LG F ADVK
Sbjct:   11 FAGLRSSGCVTFSNKESS-FFDVVSAQLTPKTTRSTPV-KGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSMLGTFKADVK 113          

HSP 2 Score: 26.9498 bits (58), Expect = 2.512e-29
Identity = 10/16 (62.50%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  445 KVVSNHNPVNLPWGEL 492
            KVVS+ +P+ LPW EL
Sbjct:  128 KVVSSRDPLKLPWAEL 143          
BLAST of EY679063 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 1.009e-27
Identity = 63/105 (60.00%), Postives = 75/105 (71.43%), Query Frame = 2
Query:   86 FSGLRNSASLPFGRKSSDDFHSVIALQTSALGSSSSGYRKVAAQAKLKVAINGFGKIGRNFLRCWNGRKDSPLEVVAINDTGGVKQASHLLKYDSNLGIFDADVK 400
            FSGLR S+    G ++S  F   +A Q      ++S   +    AKLKVAINGFG+IGRNFLRCW+GRKDSPLEVV +ND+GGVK ASHLLKYDS LG F A+VK
Sbjct:   41 FSGLRMSS---IGGEAS--FFDAVAAQIIPKAVTTSTPVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSGGVKNASHLLKYDSMLGTFKAEVK 140          

HSP 2 Score: 28.8758 bits (63), Expect = 1.009e-27
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  445 KVVSNHNPVNLPWGEL 492
            KVVSN +P+ LPW EL
Sbjct:  155 KVVSNRDPLKLPWAEL 170          
BLAST of EY679063 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.974e-25
Identity = 56/86 (65.12%), Postives = 67/86 (77.91%), Query Frame = 2
Query:  167 TSALGSSSSGYRKVAAQA--------KLKVAINGFGKIGRNFLRCWNGRKDSPLEVVAINDTGGVKQASHLLKYDSNLGIFDADVK 400
            T +  SS SG R  AA+A        K++VAINGFG+IGRNFLRCW+GR+++ L+VVAIND+GGVKQASHLLKYDS LG F ADVK
Sbjct:   11 TGSAVSSKSGVRAKAARAVVDVRAEKKIRVAINGFGRIGRNFLRCWHGRQNTLLDVVAINDSGGVKQASHLLKYDSTLGTFAADVK 96          

HSP 2 Score: 27.335 bits (59), Expect = 1.974e-25
Identity = 20/69 (28.99%), Postives = 37/69 (53.62%), Query Frame = 1
Query:  445 KVVSNHNPVNLPWGELEHQHL*LKGKEIVCNNIKG*GATSFSGWCPIKFLFTSPTAREKNPKTHLFGAH 651
            K+VS+ +P+ LPW E+ +  L ++G  +  + +   GA         K L T+P A++K+  T + G +
Sbjct:  111 KIVSSRDPLQLPWKEM-NIDLVIEGTGVFIDKV---GAGKHIQAGASKVLITAP-AKDKDIPTFVVGVN 174          
The following BLAST results are available for this feature:
BLAST of EY679063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
G3PA_PEA3.097e-5074.42Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_TOBAC1.616e-4571.79Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_SPIOL2.105e-4569.53Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_ARATH1.752e-4472.09Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PA_MAIZE2.901e-4167.44Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]
G3PB_SPIOL1.279e-3163.81Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_PEA5.154e-3057.55Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_TOBAC2.512e-2960.95Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_ARATH1.009e-2760.00Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PA_CHLRE1.974e-2565.12Glyceraldehyde-3-phosphate dehydrogenase A, chloro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-054-G03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679063 ID=EY679063; Name=EY679063; organism=Citrus sinensis; type=EST; length=871bp
CATCCAGCAAATACCTATCATGGCTTCGGCCACTCTCTCTGTAGCCAAAT
CAGCTCTTCAGGGATATGGTAAGGGATTCTCATAATTCTCAGGTCTACGC
AACTCTGCAAGCCTTCCTTTTGGCAGGAAATCTTCTGATGACTTCCATTC
AGTCATTGCTCTCCAGACCTCTGCTTTAGGAAGCAGCAGCAGCGGGTACA
GGAAGGTTGCTGCTCAGGCAAAGCTGAAGGTTGCAATCAATGGGTTTGGT
AAAATTGGTAGGAACTTCTTGAGGTGCTGGAACGGCCGCAAGGACTCTCC
ACTTGAAGTCGTTGCCATCAATGACACCGGAGGTGTCAAGCAGGCCTCTC
ACCTCCTCAAGTACGACTCCAACCTTGGCATCTTTGACGCCGATGTTAAA
ACCAATTGGTACTGAAGGCATCTCTGTATATGGCAACGTCATCTAAGGTT
GTTTCTAACCACAACCCCGTCAATCTCCCCTGGGGGGAATTGGAGCATCA
ACACTTGTGATTGAAAGGAAAAGAAATTGTTTGTAACAACATAAAGGGGT
GAGGGGCAACCTCCTTTTCAGGCTGGTGCCCAATTAAGTTCTTATTTACA
TCACCCACGGCAAGGGAGAAAAATCCAAAAACCCATTTGTTTGGGGCTCA
CATGCCGAAGCTTTGCAAAGCCCAAAGGATCCATACCACTGATAAATGTA
TCCAATGACAAACCCATATGCCTTGATACCCTTTTCTGAAAGAGACTCAT
TGAACATAAAATTTGGGAAAATTTATACTGGAAAATCCATAAAACCCCCA
AATCAAACAACAAACTTAGAGTTCAGATTAAAGCATTATCCCTAGAGCAA
ATACCCAACCTGTGGACATTT
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