CX300780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300780 vs. ExPASy Swiss-Prot
Match: DHSB2_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH2-2 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 4.136e-17 Identity = 43/73 (58.90%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 15 LACLCYIDKASDTTTINPLPHMYVVKDLVTDLSNFYEQYKSIKPWLQIKEGEHHDLNKGEFLQSKEDRKKLDG 233 LACL I+ S TTI PLPHM+V+KDLV D++NFY QYKSI+PWL+ K + E LQSK+DR KLDG Sbjct: 119 LACLTKIESGSKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPA--SVPGKEILQSKKDRAKLDG 189
BLAST of CX300780 vs. ExPASy Swiss-Prot
Match: DHSB_DROME (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Drosophila melanogaster GN=SdhB PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 9.214e-17 Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 15 LACLCYID-KASDTTTINPLPHMYVVKDLVTDLSNFYEQYKSIKPWLQIKEGEHHDLNKGEFLQSKEDRKKLDG 233 LAC+ ID S + + PLPHMYVV+DLV D++NFYEQY++I+PWLQ K K ++LQS EDR KLDG Sbjct: 118 LACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDG 191
BLAST of CX300780 vs. ExPASy Swiss-Prot
Match: DHSB1_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH2-1 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.053e-16 Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 3 Query: 15 LACLCYIDKASDTTTINPLPHMYVVKDLVTDLSNFYEQYKSIKPWLQIKEGEHHDLNKGEFLQSKEDRKKLDG 233 LACL I + TTI PLPHM+V+KDLV D++NFY QYKSI+PWL+ K + E LQSK+DR KLDG Sbjct: 120 LACLTKIQDEASETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPA--SVPAKEILQSKKDRAKLDG 190
BLAST of CX300780 vs. ExPASy Swiss-Prot
Match: DHSB_USTMA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Ustilago maydis GN=SDH2 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.681e-16 Identity = 42/73 (57.53%), Postives = 57/73 (78.08%), Query Frame = 3 Query: 15 LACLCYIDKASDTTTINPLPHMYVVKDLVTDLSNFYEQYKSIKPWLQIKEGEHHDLNKGEFLQSKEDRKKLDG 233 LACLC IDK +DT I PLPHMY+VKDLV DL+ FY+QY+SI+P+L+ ++ ++GE LQS E+R++LDG Sbjct: 124 LACLCRIDKQNDTK-IYPLPHMYIVKDLVPDLTQFYKQYRSIEPFLK----SNNTPSEGEHLQSPEERRRLDG 191
BLAST of CX300780 vs. ExPASy Swiss-Prot
Match: DHSB_DANRE (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Danio rerio GN=sdhb PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.972e-16 Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 3 Query: 15 LACLCYID-KASDTTTINPLPHMYVVKDLVTDLSNFYEQYKSIKPWLQIKEGEHHDLNKGEFLQSKEDRKKLDG 233 LACL ID S T I PLPHMYVVKDLV D+SNFY QYKSI+P+L K+ + K ++LQS EDR+KLDG Sbjct: 110 LACLNKIDTNTSKVTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYL--KKKDESQQGKQQYLQSVEDRQKLDG 181
BLAST of CX300780 vs. ExPASy Swiss-Prot
Match: DHSB_CANGA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Candida glabrata GN=SDH2 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.972e-16 Identity = 44/74 (59.46%), Postives = 55/74 (74.32%), Query Frame = 3 Query: 15 LACLCYIDK-ASDTTTINPLPHMYVVKDLVTDLSNFYEQYKSIKPWLQIKEGEHHDLNKGEFLQSKEDRKKLDG 233 LACLC ID+ S TT I PLPHM++VKDLV DL+ FY+QYKSI+P+LQ + + + E LQS +DRKKLDG Sbjct: 92 LACLCKIDQDESKTTKIYPLPHMFIVKDLVPDLTGFYQQYKSIQPYLQRTD---YPADGKEVLQSIDDRKKLDG 162
BLAST of CX300780 vs. ExPASy Swiss-Prot
Match: DHSB_CHICK (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Gallus gallus GN=SDHB PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.019e-15 Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = 3 Query: 15 LACLCYIDK-ASDTTTINPLPHMYVVKDLVTDLSNFYEQYKSIKPWLQIKEGEHHDLNKGEFLQSKEDRKKLDG 233 LAC ID S TT I PLPHMYVVKDLV DLSNFY QYKSI+P+L K+ + K ++LQS EDR+KLDG Sbjct: 121 LACTKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYL--KKKDESKQGKEQYLQSIEDRQKLDG 192
BLAST of CX300780 vs. ExPASy Swiss-Prot
Match: DHSB_ASHGO (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Ashbya gossypii GN=SDH2 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.738e-15 Identity = 47/74 (63.51%), Postives = 54/74 (72.97%), Query Frame = 3 Query: 15 LACLCYIDKASDTTT-INPLPHMYVVKDLVTDLSNFYEQYKSIKPWLQIKEGEHHDLNKGEFLQSKEDRKKLDG 233 LACLC ID+A + I PLPHMYVVKDLV DL+NFY+QYKSI+P+LQ K + D E LQS DRKKLDG Sbjct: 100 LACLCKIDQAENKDVKIYPLPHMYVVKDLVPDLTNFYKQYKSIQPYLQ-KASKPAD--GREHLQSIADRKKLDG 170
BLAST of CX300780 vs. ExPASy Swiss-Prot
Match: DHSB_RECAM (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit OS=Reclinomonas americana GN=SDH2 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.056e-15 Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 15 LACLCYIDKASDTTTINPLPHMYVVKDLVTDLSNFYEQYKSIKPWLQIKEGEHHDLNKGEFLQSKEDRKKLDG 233 LAC+ ID I PLPHM+++KDLV DLSNFY QYKSI+PW++ E + L+K EF QS+ DR+KLDG Sbjct: 79 LACIKSIDTNKKEMKIYPLPHMHIIKDLVPDLSNFYAQYKSIEPWMKTTEKK---LDK-EFYQSRNDREKLDG 147
BLAST of CX300780 vs. ExPASy Swiss-Prot
Match: DHSB_XENTR (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Xenopus tropicalis GN=sdhb PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.603e-15 Identity = 44/74 (59.46%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 15 LACLCYID-KASDTTTINPLPHMYVVKDLVTDLSNFYEQYKSIKPWLQIKEGEHHDLNKGEFLQSKEDRKKLDG 233 LAC ID S + I PLPHMYVVKDLV DLSNFY QYKSI+P+L+ K+ K ++LQS EDR KLDG Sbjct: 115 LACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESQE--GKEQYLQSIEDRDKLDG 186 The following BLAST results are available for this feature:
BLAST of CX300780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300780 ID=CX300780; Name=CX300780; organism=Citrus sinensis; type=EST; length=233bpback to top |