CX043932
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043932 vs. ExPASy Swiss-Prot
Match: IMA_SOLLC (Importin subunit alpha OS=Solanum lycopersicum PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 5.048e-41 Identity = 85/142 (59.86%), Postives = 104/142 (73.24%), Query Frame = 1 Query: 73 MSLRPSTRAEVRKKGYKTGVXXXXXXXXXXXNLVEIRKNKREDNLLKKRREGXXXXXXXXXXDASQNAIEKNLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWAL 498 MSLRP++R E R+ YK V N+VEIRKNKRE+NLLKKRREG A+ + ++K LE++P ++ GVWS+D +LQLE TTQFRKLLSIER+PPI+EVI++GVVPRFVEFL R D PQLQFEAAWAL Sbjct: 1 MSLRPNSRTEARRSRYKVAVDAEEGRRRREDNMVEIRKNKREENLLKKRREGLLQAQQFPST-AAVSHLDKKLETLPELIAGVWSDDSSLQLECTTQFRKLLSIERNPPIEEVIQSGVVPRFVEFLARDDYPQLQFEAAWAL 141
BLAST of CX043932 vs. ExPASy Swiss-Prot
Match: IMA1_ARATH (Importin subunit alpha-1 OS=Arabidopsis thaliana GN=KAP1 PE=2 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 1.918e-40 Identity = 85/142 (59.86%), Postives = 103/142 (72.54%), Query Frame = 1 Query: 73 MSLRPSTRAEVRKKGYKTGVXXXXXXXXXXXNLVEIRKNKREDNLLKKRREGXXXXXXXXXXDASQNAIEKNLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWAL 498 MSLRP+ + EVR+ YK V N+VEIRK+KRE++L+KKRREG AS +++K L+S+ MV GVWS+DPALQLE+TTQFRKLLSIERSPPI+EVI AGVVPRFVEFL + D P +QFEAAWAL Sbjct: 1 MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQGFP--SASAASVDKKLDSLKDMVAGVWSDDPALQLESTTQFRKLLSIERSPPIEEVISAGVVPRFVEFLKKEDYPAIQFEAAWAL 140
BLAST of CX043932 vs. ExPASy Swiss-Prot
Match: IMA1A_ORYSJ (Importin subunit alpha-1a OS=Oryza sativa subsp. japonica GN=Os01g0253300 PE=1 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 7.289e-40 Identity = 86/142 (60.56%), Postives = 104/142 (73.24%), Query Frame = 1 Query: 73 MSLRPSTRAEVRKKGYKTGVXXXXXXXXXXXNLVEIRKNKREDNLLKKRREGXXXXXXXXXXDASQNAIEKNLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWAL 498 MSLRPS R EVR+ YK V N+VEIRK++RE++LLKKRREG A+ ++K LES+P+M+ GV+S+D LQLEATTQFRKLLSIERSPPI+EVI++GVVPRFV+FL R D PQLQFEAAWAL Sbjct: 1 MSLRPSERVEVRRNRYKVAVDAEEGRRRREDNMVEIRKSRREESLLKKRREGLQAQAPVPASAAT--GVDKKLESLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWAL 140
BLAST of CX043932 vs. ExPASy Swiss-Prot
Match: IMA1B_ORYSJ (Importin subunit alpha-1b OS=Oryza sativa subsp. japonica GN=Os05g0155500 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 1.795e-38 Identity = 85/146 (58.22%), Postives = 102/146 (69.86%), Query Frame = 1 Query: 73 MSLRPSTRAEVRKKGYKTGVXXXXXXXXXXXNLVEIRKNKREDNLLKKRREGXXXXXXXXXXD----ASQNAIEKNLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWAL 498 MSLRPS RAEVR+ YK V N+VEIRK++RE++LLKKRR+G A +A+++ LE +P+MVQ V S+D A+QLEATTQFRKLLSIERSPPI+EVI GVVPRF+ FL R D PQLQFEAAWAL Sbjct: 1 MSLRPSERAEVRRSRYKVAVDADEGRRRREDNMVEIRKSRREESLLKKRRDGLPAAAAAAAAASPLLAHSSALQQKLEGLPAMVQAVQSDDSAVQLEATTQFRKLLSIERSPPIEEVINTGVVPRFIAFLQREDYPQLQFEAAWAL 146
BLAST of CX043932 vs. ExPASy Swiss-Prot
Match: IMA2_ARATH (Importin subunit alpha-2 OS=Arabidopsis thaliana GN=KAP2 PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 3.279e-32 Identity = 73/143 (51.05%), Postives = 93/143 (65.03%), Query Frame = 1 Query: 73 MSLRPSTRAEVRKKGYKTGVXXXXXXXXXXXNLVEIRKNKREDNLLKKR-REGXXXXXXXXXXDASQNAIEKNLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWAL 498 MSLRPS + EVR+ YK V NLVEIRKNKRE+NL KKR + ++ + +++P+MV G+WSED QLEAT RKLLSIE++PPI+EV+++GVVPR V+FL R D P+LQFEAAWAL Sbjct: 1 MSLRPSAKTEVRRNRYKVAVDAEEGRRRREDNLVEIRKNKREENLQKKRFTSSMAFGSATGQTEQDLSSANQLKDNLPAMVAGIWSEDSNSQLEATNLLRKLLSIEQNPPINEVVQSGVVPRVVKFLSRDDFPKLQFEAAWAL 143
BLAST of CX043932 vs. ExPASy Swiss-Prot
Match: IMAB_DICDI (Importin subunit alpha-B OS=Dictyostelium discoideum GN=DDB_G0272318 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.059e-26 Identity = 65/136 (47.79%), Postives = 84/136 (61.76%), Query Frame = 1 Query: 91 TRAEVRKKGYKTGVXXXXXXXXXXXNLVEIRKNKREDNLLKKRREGXXXXXXXXXXDASQNAIEKNLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWAL 498 ++ E RK YK + + IRKNKRE++LLKKR + + I + LE +PS+V + SE+P L L++TT FRKLLSIE+SPPI+EVIK G+VPR V+FL D PQLQFEAAWAL Sbjct: 4 SKQETRKSQYKKSIDSDESRRKREEASLSIRKNKREESLLKKRTQAVPGSTPVKV----DSLINQRLEQLPSLVAEINSENPDLILKSTTAFRKLLSIEKSPPIEEVIKTGIVPRLVKFLYMQDFPQLQFEAAWAL 135
BLAST of CX043932 vs. ExPASy Swiss-Prot
Match: IMA3_MOUSE (Importin subunit alpha-3 OS=Mus musculus GN=Kpna3 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.431e-19 Identity = 52/109 (47.71%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 172 VEIRKNKREDNLLKKRREGXXXXXXXXXXDASQNAIEKNLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWAL 498 VE+RKNKR+++LLKKR DA A LE+I +Q S++P +QL A RKLLS +R+PPID++IK+G++P V+ L R D P LQFEAAWAL Sbjct: 34 VELRKNKRDEHLLKKRNVPQEESLEDSDVDADFKAQNVTLEAI---LQNATSDNPVVQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWAL 139
BLAST of CX043932 vs. ExPASy Swiss-Prot
Match: IMA3_HUMAN (Importin subunit alpha-3 OS=Homo sapiens GN=KPNA3 PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 5.431e-19 Identity = 52/109 (47.71%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 172 VEIRKNKREDNLLKKRREGXXXXXXXXXXDASQNAIEKNLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWAL 498 VE+RKNKR+++LLKKR DA A LE+I +Q S++P +QL A RKLLS +R+PPID++IK+G++P V+ L R D P LQFEAAWAL Sbjct: 34 VELRKNKRDEHLLKKRNVPQEESLEDSDVDADFKAQNVTLEAI---LQNATSDNPVVQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWAL 139
BLAST of CX043932 vs. ExPASy Swiss-Prot
Match: IMA1_XENLA (Importin subunit alpha-1 OS=Xenopus laevis GN=kpna1 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 6.004e-18 Identity = 45/109 (41.28%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 172 VEIRKNKREDNLLKKRREGXXXXXXXXXXDASQNAIEKNLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWAL 498 VE+RK K+++ +LK+R + +++ S+ +VQG+ S DP +L T RK+LS ER+PP++++I+AG++P+ VEFL RHD LQFEAAWAL Sbjct: 33 VELRKAKKDEQILKRRNVCLPEELILSPEKNAMQSVQVPPLSLEEIVQGMNSGDPENELRCTQAARKMLSRERNPPLNDIIEAGLIPKLVEFLSRHDNSTLQFEAAWAL 141
BLAST of CX043932 vs. ExPASy Swiss-Prot
Match: IMA4_MOUSE (Importin subunit alpha-4 OS=Mus musculus GN=Kpna4 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.338e-17 Identity = 49/110 (44.55%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 169 LVEIRKNKREDNLLKKRREGXXXXXXXXXXDASQNAIEKNLESIPSMVQGVWSEDPALQLEATTQFRKLLSIERSPPIDEVIKAGVVPRFVEFLGRHDMPQLQFEAAWAL 498 +VE+RKNKR+++LLK+R D +LE+I VQ S++ +QL A RKLLS +R+PPID++IK+G++P V L R D P LQFEAAWAL Sbjct: 33 VVELRKNKRDEHLLKRRNVPQEDICEDSDIDGDYRVQNTSLEAI---VQNASSDNQGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWAL 139 The following BLAST results are available for this feature:
BLAST of CX043932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043932 ID=CX043932; Name=CX043932; organism=Citrus sinensis; type=EST; length=500bpback to top |