DR909002

Overview
NameDR909002
Unique NameDR909002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length552
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR909002 vs. ExPASy Swiss-Prot
Match: SCRL2_ORYSJ (SCAR-like protein 2 OS=Oryza sativa subsp. japonica GN=Os01g0208600 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.048e-11
Identity = 40/73 (54.79%), Postives = 50/73 (68.49%), Query Frame = 3 
Query:   15 QQKLNGKKEVNQSANG-KGMDEKEDFLHQIRTKSFSLRPTVAARPTFSPAPGANVKVTAILEKANAIRQAVAS 230
            QQKLNG ++     N  K +DE+E+ L QIR+K+F+LR T A++   S    AN  V AILEKANAIRQAVAS
Sbjct: 1250 QQKLNGHEKSKAVGNDTKNLDEREELLQQIRSKTFNLRRTNASKTNTSSPTTANSSVVAILEKANAIRQAVAS 1322
The following BLAST results are available for this feature:
BLAST of DR909002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SCRL2_ORYSJ1.048e-1154.79SCAR-like protein 2 OS=Oryza sativa subsp. japonic... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_17130 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-32_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR909002 ID=DR909002; Name=DR909002; organism=Citrus sinensis; type=EST; length=552bp
GCAAGCTGGAGGACCAGCAGAAGTTGAATGGGAAGAAGGAAGTTAATCAG
AGTGCAAATGGCAAGGGGATGGATGAAAAAGAGGACTTTTTGCATCAAAT
CAGAACAAAATCATTCAGCCTGAGGCCAACAGTAGCAGCAAGGCCAACCT
TCTCTCCAGCTCCCGGTGCAAACGTCAAAGTCACTGCAATTTTAGAGAAA
GCAAATGCAATCCGACAGGCTGTGGCTAGCGATGATGGTGAGGACGATGA
TAACTGGAGTGATACTTGATAATTTTGGGATGCCATAACATCGGTAAGAG
AATCCAATCTTCTTATTGTTCTGGCTCTGTGATGTTGGCCATTGGGCAAT
GCTGTTATACATATGTGCATAATCCCAGTTTCTTTTTGTAATTAATTTGT
AGGGCTCTTCCTGTATCTATTTGCAATTGTTTCATTAATTTCTTGAGTTT
AAAATTTATGTTGTAAACAATGAGATTAGTTCTGACATGATATGTAATCT
TATCTTTGAGGCGATTATTTATTGAAATGTCCAAGATTATTCAAAAAAAA
AA
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