DR909000

Overview
NameDR909000
Unique NameDR909000
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length552
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR909000 vs. ExPASy Swiss-Prot
Match: 5NG4_PINTA (Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.169e-16
Identity = 42/98 (42.86%), Postives = 58/98 (59.18%), Query Frame = 1 
Query:    4 VSLIMERDMSAWKIGFDSRLLAAAYSGVVCSGIAYYVQGFVSKQKGPVFVTSFSPLCMIITSALGVIILAELVHLGSILGAILIVFGLYTVVWGKSKD 297
            ++   E D+  WKI     L    Y+G V SGIA+ VQ +   + GPVFV  + P+  I  + +  IIL E  +LG I GAILI+ GLY V+WGKS++
Sbjct:  246 IAAFFETDLEHWKIHSGGELFTILYAGFVASGIAFSVQIWCIDRGGPVFVAVYQPVQTIAVAIMASIILGEQFYLGGIFGAILIIIGLYLVLWGKSEE 343
The following BLAST results are available for this feature:
BLAST of DR909000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
5NG4_PINTA4.169e-1642.86Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_17128 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-21_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR909000 ID=DR909000; Name=DR909000; organism=Citrus sinensis; type=EST; length=552bp
GCAGTGTCTTTGATCATGGAACGTGACATGAGTGCCTGGAAAATTGGCTT
CGACTCAAGGCTCCTCGCTGCTGCTTACTCGGGAGTGGTCTGCTCAGGCA
TTGCATATTATGTGCAAGGTTTTGTCAGTAAACAAAAAGGGCCAGTTTTT
GTCACATCTTTTAGCCCTTTATGCATGATTATTACATCAGCTTTAGGAGT
CATTATTTTGGCTGAGCTAGTCCATCTTGGAAGCATACTTGGAGCAATTC
TCATTGTGTTTGGACTATACACTGTTGTGTGGGGCAAAAGCAAAGATCCT
CCAAGCTCAGCAGCATCATTCACTGATGAGAAAGCAGCTGCACAAGAGTT
ACCCATCACATGTAAATCAATTAATGTTGATGATAATAACATTGATGGCC
CAGCTGGGATGCTGAAGATTAATCAAGCCAAGAGTACCTTAACTCAAGGA
GCTTGAAAAATGACATCAAAAAATTTTGAAGAAATTTAGCAGAAATTTCT
CCAAAGGGATCAATTATAATACTATTCAAAGCCTTTGGTCTCTCTCTCTC
TC
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