DR908998

Overview
NameDR908998
Unique NameDR908998
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length552
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908998 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 2.151e-65
Identity = 113/140 (80.71%), Postives = 127/140 (90.71%), Query Frame = 3
Query:    3 NGIGGSPPATLAEITLGQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNS--RVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGSNYLLTFC 416
            NG GG PPATLAEITLG + DFYDVSLVDGYN+AMSI+P++GSG+CSYAGCVSDLN MCP GLQVRS +  RVVACKSAC AFNSP+YCCTG FGNPQSCKPTAYS+IFK ACP+AYSYAYDDPTSIATC+ +NY++TFC
Sbjct:   99 NGAGGEPPATLAEITLGPELDFYDVSLVDGYNLAMSIMPVKGSGQCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKANYIVTFC 238          
BLAST of DR908998 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 8.497e-46
Identity = 87/137 (63.50%), Postives = 99/137 (72.26%), Query Frame = 3
Query:   12 GGSPPATLAEITLGQQ--QDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGSNYLLTFC 416
            GG PP TLAE TL     +DFYDVSLVDGYN+ + I P  GSG C YAGCVSDLN  CP  L+V   + VVACKSAC  FN+ +YCC G+   P++C PT YSRIFK ACP AYSYAYDD TS  TCTG+NY +TFC
Sbjct:  102 GGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSGDCKYAGCVSDLNAACPDMLKVMDQNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTGANYEITFC 238          
BLAST of DR908998 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.148e-42
Identity = 81/142 (57.04%), Postives = 103/142 (72.54%), Query Frame = 3
Query:    3 NGIGGSPPATLAEITLGQQ--QDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVR-SNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTG-SNYLLTFC 416
            NG G +PPATL EIT+     QDFYDVSLVDG+N+ MS+ P  G+GKC  + C +D+N +CPA LQV+ S+  V+ACKSAC AFN P+YCCT     P++C P  YS++FK  CP+AYSYAYDD +S  TC+G   YL+TFC
Sbjct:  104 NGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPMSVAPQGGTGKCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFC 245          
BLAST of DR908998 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 4.825e-41
Identity = 76/142 (53.52%), Postives = 100/142 (70.42%), Query Frame = 3
Query:    3 NGIGGSPPATLAEITLGQQ--QDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVR-SNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGS-NYLLTFC 416
            NG G SPPA+L E+TL     QDFYDVSLVDG+N+ + + P  GSG C+   C +++N +CPA L  + S+  V+ CKSAC A N P+YCCTG++G P +C PT +S++FK  CP+AYSYAYDD +S  TC G  NY +TFC
Sbjct:  102 NGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSGDCNSTSCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFC 243          
BLAST of DR908998 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.127e-40
Identity = 78/142 (54.93%), Postives = 103/142 (72.54%), Query Frame = 3
Query:    3 NGIGGSPPATLAEITLGQQQ--DFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVR-SNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGS-NYLLTFC 416
            NG G  PPA+L EI +   +  DFYDVSLVDGYN+ +S+    G+G C    C +++N +CPA LQV+ S++ V+ACKSAC AFN P+YCCTG+F   ++C  T YSRIFK  CP+AYSYAYDD TS  TC+G+ +Y++TFC
Sbjct:  101 NGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTGDCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFC 242          
BLAST of DR908998 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.458e-39
Identity = 74/142 (52.11%), Postives = 100/142 (70.42%), Query Frame = 3
Query:    3 NGIGGSPPATLAEITLGQQ--QDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRS-NSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGS-NYLLTFC 416
            NG G  PPATL EIT+     QD+YDVSLVDG+N+ MS+ P  G+G+C  + C +++N+ CPA LQV++ +  V++CKSAC AF   +YCCT     P++C PT YS IF+  CP+AYSYAYDD  S  TC+G  +Y++TFC
Sbjct:   70 NGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 211          
BLAST of DR908998 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.516e-39
Identity = 74/142 (52.11%), Postives = 100/142 (70.42%), Query Frame = 3
Query:    3 NGIGGSPPATLAEITLGQQ--QDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRS-NSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGS-NYLLTFC 416
            NG G  PPATL EIT+     QD+YDVSLVDG+N+ MS+ P  G+G+C  + C +++N +CPA LQV++ +  V++CKSAC AF   +YCCT     P++C PT YS IF+  CP+AYSYAYDD  S  TC+G  +Y++TFC
Sbjct:  104 NGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 245          
BLAST of DR908998 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.927e-38
Identity = 72/142 (50.70%), Postives = 93/142 (65.49%), Query Frame = 3
Query:    3 NGIGGSPPATLAEITLGQQQD---FYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVRSNS-RVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGSNYLLTFC 416
            NG  G+ PAT+ E+TLG       FYDVSLVDG+N  +S+  + G   C  A C +D+N+ CP+ L+VR    RV  C+SAC A    RYCCTG + +P +C+PT +S +FKA CPRAYSYAYDD TS+  C    YL+TFC
Sbjct:  107 NGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGGGVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRCHAKRYLITFC 248          
BLAST of DR908998 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 6.521e-38
Identity = 77/142 (54.23%), Postives = 94/142 (66.20%), Query Frame = 3
Query:    3 NGIGGSPPATLAEITL--GQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQVR-SNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGS-NYLLTFC 416
            NG G  PPATLAE  +  G  QDFYDVSLVDG+N+ MS+ P  G+G C  A C +++N +CP+ LQ + S+  VVAC SAC  F +P+YCCT     P++C PT YS IF  ACP AYSYAYDD     TC G  NY +TFC
Sbjct:  103 NGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFC 244          
BLAST of DR908998 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.453e-37
Identity = 76/142 (53.52%), Postives = 95/142 (66.90%), Query Frame = 3
Query:    3 NGIGGSPPATLAEITL--GQQQDFYDVSLVDGYNIAMSILPIRGSGKCSYAGCVSDLNLMCPAGLQ-VRSNSRVVACKSACFAFNSPRYCCTGSFGNPQSCKPTAYSRIFKAACPRAYSYAYDDPTSIATCTGS-NYLLTFC 416
            NG  G PPATLAE T+  G  QDFYDVSLVDG+N+ MS+ P  G+G C    C +++NL+CP+ LQ + S+  VVAC SAC  F  P+YCCT      + C PT YS+IF   CP AYSYA+DD   + TC+G  NYL+TFC
Sbjct:  100 NGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPMSVTPQGGTGTCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFC 241          
The following BLAST results are available for this feature:
BLAST of DR908998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
TLPH_ARATH2.151e-6580.71Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
PR5_ARATH8.497e-4663.50Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP1_PRUPE1.148e-4257.04Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP1_PYRPY4.825e-4153.52Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TLP1_CASSA3.127e-4054.93Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TP1B_MALDO3.458e-3952.11Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TP1A_MALDO4.516e-3952.11Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLPH_ORYSJ2.927e-3850.70Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TLP_PRUAV6.521e-3854.23Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLP2_PRUPE1.453e-3753.52Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_17126 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-12_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908998 ID=DR908998; Name=DR908998; organism=Citrus sinensis; type=EST; length=552bp
GCAACGGCATAGGCGGCAGCCCGCCGGCCACCCTCGCCGAAATCACGCTG
GGGCAGCAGCAGGACTTCTACGACGTGAGCCTGGTCGACGGTTACAACAT
CGCAATGTCGATTTTGCCCATCAGAGGCTCCGGGAAATGCAGCTACGCTG
GGTGTGTGAGTGACCTGAACTTGATGTGTCCCGCGGGGCTACAAGTGAGG
TCCAACAGCAGAGTGGTGGCCTGCAAAAGTGCTTGTTTCGCTTTCAACTC
GCCCAGGTATTGCTGCACTGGGAGCTTTGGGAATCCTCAATCCTGCAAGC
CCACTGCTTACTCCAGGATTTTCAAGGCCGCTTGTCCCAGAGCTTACAGC
TATGCTTATGATGATCCCACTAGTATTGCTACTTGCACCGGCAGCAACTA
CTTGCTCACTTTCTGCCCCCGCCATCGCCGTTAGATTTTTATACCCATTA
TCTACCACTACTACTACATACGCTATCAAGTTCATTTGTAATAAGATAAG
ATTATTATTATTATATCATATGGTATGTTATGTTTACTAGTAAAAAAAAA
AA
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