DR908991

Overview
NameDR908991
Unique NameDR908991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR908991 vs. ExPASy Swiss-Prot
Match: UMP2_ARATH (Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana GN=At2g27730 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.711e-25
Identity = 65/115 (56.52%), Postives = 86/115 (74.78%), Query Frame = 3 
Query:   90 MASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPAASSGSGAEAKPTSAAGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSRKKE-QVQD 431
            MA+R A+R  SRRFSS GKVLSEEE+AAENV+IKK+EQEKL+K+AR+GP  +   +AS    A A   SA+  S  KVS D+ RNYAV+AG++  V ++GWYLK+  KK+ +VQ+
Sbjct:    1 MATRNALRIVSRRFSS-GKVLSEEERAAENVFIKKMEQEKLQKLARQGPGEQAAGSASEAKVAGA-TASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPEVQE 113
The following BLAST results are available for this feature:
BLAST of DR908991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UMP2_ARATH3.711e-2556.52Uncharacterized protein At2g27730, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_17119 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-07_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908991 ID=DR908991; Name=DR908991; organism=Citrus sinensis; type=EST; length=553bp
ACCAAAACAAACCTCCCCATTTCATTTCTCCAACACACAAAGCCGAAAAG
CTTCCTCCGTGTATCCAAAAGGGTTTTATGACCACCATCATGGCTTCAAG
GATTGCTGTAAGAAATTTTTCTCGAAGGTTCTCAAGCAGTGGCAAAGTAC
TGAGTGAGGAGGAAAAAGCAGCTGAGAATGTTTACATCAAAAAAGTTGAG
CAAGAGAAATTGGAGAAGATGGCACGCAAGGGACCCAAGCCGGAAGAGAC
ACCTGCTGCTAGCTCAGGGTCAGGAGCTGAAGCCAAACCTACCTCAGCCG
CGGGAGCTTCAACTGAGAAAGTATCAACTGACCAGTACCGTAACTATGCA
GTCATAGCTGGTATCATAACTGGTGTTAGTGCTCTCGGATGGTATCTCAA
ATCAAGCAGGAAGAAAGAACAAGTCCAGGACTGAAGTCAATATGCTAGAT
ATAGATAATGAGGGCCATGGACGACATTCTATCTACGACAACTGCTCACT
ACTGAGTTCATACATTGCTTGGAAATAAACAGAACTTGGATTATTATTGA
CCC
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