DR908987
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_CITSI (30S ribosomal protein S19, chloroplastic OS=Citrus sinensis GN=rps19 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 8.613e-46 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR Sbjct: 5 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_EUCGG (30S ribosomal protein S19, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rps19 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 7.291e-45 Identity = 85/88 (96.59%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKKNPFVANHLLRKI+KLNTKAEKEIIITWSRASTIIPTM+GHTIAIHNGREHLPIYITDRMVGHKLGEF+PTINFRGHAKNDNRSRR Sbjct: 5 LKKNPFVANHLLRKIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPIYITDRMVGHKLGEFSPTINFRGHAKNDNRSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_CARPA (30S ribosomal protein S19, chloroplastic OS=Carica papaya GN=rps19 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 9.523e-45 Identity = 84/88 (95.45%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKKNPFVANHLLRKI+KLNTKAEKEIIITWSRASTIIPTM+GHTIAIHNGREHLP+YITDRMVGHKLGEFAPTINFRGHAKNDN+SRR Sbjct: 5 LKKNPFVANHLLRKIEKLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGREHLPVYITDRMVGHKLGEFAPTINFRGHAKNDNKSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_PLAOC (30S ribosomal protein S19, chloroplastic OS=Platanus occidentalis GN=rps19 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 2.121e-44 Identity = 83/88 (94.32%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKKNPFVANHLLRKI+KLNTKAEKEII+TWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPT+NFRGHAKNDNRSRR Sbjct: 5 LKKNPFVANHLLRKIEKLNTKAEKEIIVTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTMNFRGHAKNDNRSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_FAGEA (30S ribosomal protein S19, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale GN=rps19 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 6.172e-44 Identity = 80/88 (90.91%), Postives = 87/88 (98.86%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKKNPFVANHLLRK+DKLNTK EKEII+TWSRASTIIPTM+GHTIAIHNGREHLP+YITDRM+GHKLGEF+PT+NFRGHAKNDNRSRR Sbjct: 5 LKKNPFVANHLLRKLDKLNTKEEKEIIVTWSRASTIIPTMIGHTIAIHNGREHLPVYITDRMIGHKLGEFSPTLNFRGHAKNDNRSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_SPIOL (30S ribosomal protein S19 alpha, chloroplastic OS=Spinacia oleracea GN=rps19 PE=1 SV=4) HSP 1 Score: 176.407 bits (446), Expect = 8.061e-44 Identity = 82/88 (93.18%), Postives = 87/88 (98.86%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKKNPFVANHLLRKI+KLN KAEKEII+TWSRASTIIPTM+GHTIAIHNGREHLPIYITDRMVGHKLGEFAPT+NFRGHAKNDN+SRR Sbjct: 5 LKKNPFVANHLLRKIEKLNKKAEKEIIVTWSRASTIIPTMIGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTLNFRGHAKNDNKSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_SOYBN (30S ribosomal protein S19, chloroplastic OS=Glycine max GN=rps19 PE=3 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 8.061e-44 Identity = 82/88 (93.18%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKKNPFVANHLLRKI+KLNTKAEK+IIITWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEF+PT+NFRGHAKNDNRSRR Sbjct: 5 LKKNPFVANHLLRKINKLNTKAEKDIIITWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFSPTLNFRGHAKNDNRSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_GOSHI (30S ribosomal protein S19, chloroplastic OS=Gossypium hirsutum GN=rps19 PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 8.061e-44 Identity = 82/88 (93.18%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKKNPFVANHLL+KI++LNTKAEKEIIITWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPTINFRGHAKNDN+SRR Sbjct: 5 LKKNPFVANHLLKKIERLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNKSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_GOSBA (30S ribosomal protein S19, chloroplastic OS=Gossypium barbadense GN=rps19 PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 8.061e-44 Identity = 82/88 (93.18%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKKNPFVANHLL+KI++LNTKAEKEIIITWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEFAPTINFRGHAKNDN+SRR Sbjct: 5 LKKNPFVANHLLKKIERLNTKAEKEIIITWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNKSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_PHAVU (30S ribosomal protein S19, chloroplastic OS=Phaseolus vulgaris GN=rps19 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.375e-43 Identity = 81/88 (92.05%), Postives = 88/88 (100.00%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKKNPFVANHLLRKI+KLNTKAEK+II+TWSRASTIIPTM+GHTIAIHNG+EHLPIYITDRMVGHKLGEF+PT+NFRGHAKNDNRSRR Sbjct: 5 LKKNPFVANHLLRKINKLNTKAEKDIILTWSRASTIIPTMIGHTIAIHNGKEHLPIYITDRMVGHKLGEFSPTLNFRGHAKNDNRSRR 92 The following BLAST results are available for this feature:
BLAST of DR908987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908987 ID=DR908987; Name=DR908987; organism=Citrus sinensis; type=EST; length=554bpback to top |