DR908986

Overview
NameDR908986
Unique NameDR908986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length554
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908986 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.338e-22
Identity = 52/65 (80.00%), Postives = 54/65 (83.08%), Query Frame = 1
Query:    1 HLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAKQ 195
            HLYNQVSYMSLDQISPLTFSIGNTMKR          FHTP+QPVNALGAAIAI GTF+YSQAKQ
Sbjct:  324 HLYNQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYSQAKQ 388          
BLAST of DR908986 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.479e-21
Identity = 51/64 (79.69%), Postives = 53/64 (82.81%), Query Frame = 1
Query:    1 HLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 192
            HLYNQVSYMSLDQISPLTFS+GNTMKR          F TPVQPVNALGAAIAILGTF+YSQAK
Sbjct:  324 HLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYSQAK 387          
BLAST of DR908986 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.813e-11
Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 1
Query:    1 HLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAKQ 195
            H Y QVSYM L ++SP+T S+GN +KR          F TPV PVNA G  IA+ G F+YS+ K+
Sbjct:  330 HAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPVNAFGTGIALAGVFLYSRVKR 394          
The following BLAST results are available for this feature:
BLAST of DR908986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
GPT2_ARATH1.338e-2280.00Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH1.479e-2179.69Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
TPT2_BRAOB1.813e-1149.23Triose phosphate/phosphate translocator, non-green... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_17114 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-25_E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908986 ID=DR908986; Name=DR908986; organism=Citrus sinensis; type=EST; length=554bp
CACTTGTACAACCAAGTTTCATACATGTCTCTCGATCAAATTTCTCCATT
GACATTCAGCATTGGCAACACAATGAAGCGAATCTCTGTCATAGTCTCCT
CCATCATCATCTTCCACACGCCAGTTCAACCCGTCAATGCTCTTGGAGCC
GCCATTGCAATACTCGGCACCTTCATCTATTCACAGGCAAAGCAGTGAAG
GATTTTGAGGTGGTTTTGCCGCATAGTCTATGAGTTCTGCTGGAACTATT
CGCATCGAAGTCTGACAGAAGATTGATTAGAAAAAAAAAAAAGACGCTGC
TACAGTGGACGGAATGATGCTTTTATTCCTTGTAATCAAGAGTAGTATCT
ATATTATTCTCATGATGCTTGCAGCCAGATAAGTGTACAAGGGTTTTTTT
CACCCGAGAGCAGATTGTGGGTTAATGCCTTTGTTGTAAATAAGAATAAA
TGAGTTACTGAGCTGTAATGATGGTAATAGAGTTATTTATTCATTCATTT
ATTTCCCTTCATTAAGATTAATGCAAAAAATTACATATTACAGTTCTCCA
AAAA
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