DR908985

Overview
NameDR908985
Unique NameDR908985
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length554
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908985 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.599e-23
Identity = 59/162 (36.42%), Postives = 87/162 (53.70%), Query Frame = 3
Query:   87 LGTSESEPILDVYGNKVESNLEYKLLEVKNGTSGGFSIHGGTNGE-CPLDVVQLSSPTERDHYVRLLPFDNST-VVRESTDLNL-----------IEPVWTVGNYNASLGKWFLTTGGIVGHPGAKTLLNWFKLKKVSVSIYNLVHCPSVCDSCVKLCNKVG 533
            +  + + P+LD  G+++++ ++Y +L   +G  GG    G   G+ CP  VVQ  S  +    V     D+   VVR STD+N+              VW + NY+ S GKW++TT G+ G PG  TL +WFK++K  V  Y    CPSVCDSC  LC+ +G
Sbjct:   23 VANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLGYKFRFCPSVCDSCTTLCSDIG 184          
BLAST of DR908985 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 7.342e-21
Identity = 62/174 (35.63%), Postives = 91/174 (52.30%), Query Frame = 3
Query:   81 PQLGTSES--EPILDVYGNKVESNLEYKLLEVKNGTSGGFSIHGGT-NGE--CPLDVVQLSSPTERDHYVRLLPFD-NSTVVRESTDLNL-----------IEPVWTVGNYNASLGKWFLTTGGIVGHPGAKTLLNWFKLKKVSVS-IYNLVHCPSVCDSCVKLCNKVGIFYVD 548
            P L  ++S   P+LD+ G K+ +   Y ++ V     GG ++   T NG   CP  VVQ     + D  +   P +    VVR STDLN+              VW +  Y+ S G++F+T GG+ G+PG +T+ +WFK+++   S  Y LV CP+VC SC   C  VGI Y+D
Sbjct:   24 PLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGI-YID 196          
BLAST of DR908985 vs. ExPASy Swiss-Prot
Match: SPI2_SOLTU (Serine protease inhibitor 2 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.359e-13
Identity = 51/170 (30.00%), Postives = 85/170 (50.00%), Query Frame = 3
Query:   96 SESEPILDVYGNKVESNLEYKLLEVKNGTSGGFSIHGGT-NGECPL---------DVVQLSSPTE----RDHYVRLLPFDNSTV----VRESTDLNLIEPVWTVGNYNASLGKWFLTTGGIVGHPGAKTLLNWFKLKKVSVSIYNLVHCPSVCDSCVKLCNKVGIFYVDG 551
            S++ P+LDV G +++S L Y+++    G  GG    G + N + P          DV    +P        H+ + + F+N  +       ++ L +   +W VG+Y+ASLG   L TGG +G   +    +WFK+ K S   YNL++CP    S  + C+KVG+ + +G
Sbjct:    3 SDATPVLDVTGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGI-FENELLNIQFAISTSKLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLGYNLLYCPVTSSSDDQFCSKVGVVHQNG 167          
BLAST of DR908985 vs. ExPASy Swiss-Prot
Match: SPI5_SOLTU (Serine protease inhibitor 5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.797e-12
Identity = 55/181 (30.39%), Postives = 85/181 (46.96%), Query Frame = 3
Query:   75 QKPQLGTSESEPILDVYGNKVESNLEYKLLEVKNGTSGGFSIHGGT-NGECPL---------DVVQLSSPTE----RDHY--------VRLLPFDNSTVVRESTDLNLIEPVWTVGNYNASLGKWFLTTGGIVGHPGAKTLLNWFKLKKVSVSIYNLVHCPSVCDSCVKLCNKVGIFYVDG 551
            Q P    S++ P+LDV G +++  L Y+++ +  G  GG    G + N + P          DV    +P        H+        +  + FD STV      L +   +W VG+Y+ASLG   L TGG +G   +    +WFK+ K S   YNL++CP   D   + C KVG+ + +G
Sbjct:   24 QNPINLPSDATPVLDVTGKELDPRLSYRIISIGRGALGGDVYLGKSPNSDAPCANGVFRFNSDVGPSGTPVRFIGSSSHFGPHIFEGELLNIQFDISTV-----KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLGYNLLYCPFSSDD--QFCLKVGVVHQNG 193          
The following BLAST results are available for this feature:
BLAST of DR908985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ASP_THECC4.599e-2336.4221 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU7.342e-2135.63Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
SPI2_SOLTU7.359e-1330.00Serine protease inhibitor 2 OS=Solanum tuberosum P... [more]
SPI5_SOLTU2.797e-1230.39Serine protease inhibitor 5 OS=Solanum tuberosum P... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_17113 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-23_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908985 ID=DR908985; Name=DR908985; organism=Citrus sinensis; type=EST; length=554bp
ATCCTTCAAAAAAATAAAGAAAATGAAGACTTCATTAGTAGCAAAACTCT
CCTTCCTTATCCTTGCCTTGGCCACAAAAGCCTCAGTTGGGCACCTCAGA
ATCTGAACCAATCTTAGATGTCTATGGCAACAAGGTCGAATCCAACCTCG
AGTATAAGCTTCTCGAAGTCAAAAATGGCACTAGTGGTGGATTCAGTATA
CATGGAGGCACAAATGGAGAGTGTCCGTTGGACGTTGTCCAACTAAGTTC
TCCTACGGAAAGGGATCATTATGTAAGATTATTACCGTTTGACAATTCTA
CAGTTGTCCGGGAATCCACTGATCTCAACTTGATAGAACCAGTATGGACA
GTTGGTAACTATAATGCTTCATTAGGAAAATGGTTTCTAACAACCGGAGG
AATCGTCGGCCACCCAGGAGCTAAAACGTTGCTAAATTGGTTTAAGCTTA
AGAAAGTTAGTGTCAGTATATACAATCTTGTTCATTGTCCATCTGTTTGC
GATTCTTGCGTTAAACTCTGTAACAAAGTCGGCATCTTTTATGTGGACGG
CGTT
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