DR908950

Overview
NameDR908950
Unique NameDR908950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_GEOTN (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Geobacillus thermodenitrificans (strain NG80-2) GN=mraW PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.359e-14
Identity = 49/114 (42.98%), Postives = 65/114 (57.02%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 344
            AVNDEL+    +L    + LAPGGR+ VI+FHSLEDRI K+TF         ++      L  + DD       R ++     KI+TK+P+ PSAEE   N R RSAKLR+ +K
Sbjct:  212 AVNDELEAFREALEQAIELLAPGGRVSVITFHSLEDRICKETF-----KKASESPPLPPGLPVLPDD------YRPVL-----KIITKKPVVPSAEELERNNRARSAKLRIAEK 309          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_GEOKA (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Geobacillus kaustophilus GN=mraW PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.319e-14
Identity = 49/115 (42.61%), Postives = 65/115 (56.52%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 347
            AVNDEL+    +L    + LAPGGR+ VI+FHSLEDRI K+TF         ++      L  + DD       R ++     KI+TK+PI PS EE   N R RSAKLR+ +K+
Sbjct:  212 AVNDELEAFREALEQAIELLAPGGRVSVITFHSLEDRICKETF-----KKASESPPLPPGLPVLPDD------YRPVL-----KIITKKPIVPSEEELERNHRARSAKLRIAEKL 310          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_PROA2 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=mraW PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.746e-14
Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 344
            AVNDEL  LES+L     CLAP GR+GV+S+HSLEDR+VK+ F       R+ +E          D       +R+ ++    K++T++ +  S +E R+N R RSA+LRVI+K
Sbjct:  223 AVNDELGVLESALEDGTACLAPSGRMGVMSYHSLEDRMVKRFF-------RDKSED---------DWGPKGVGLREPLRSAGFKLVTRKSVVASDDEVRINPRARSARLRVIEK 320          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_HELMO (S-adenosyl-L-methionine-dependent methyltransferase mraW (Fragment) OS=Heliobacillus mobilis GN=mraW PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.811e-14
Identity = 54/115 (46.96%), Postives = 66/115 (57.39%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 347
            AVNDEL  L+ +L A  D LAP GRL VISFHSLEDRIVK  F        E A+G         D  +     +  +     KI+T++PIT S EE ++N R +SAKLRV QKI
Sbjct:  214 AVNDELGALQEALPAALDALAPSGRLAVISFHSLEDRIVKNFF-------AEQAKG----CTCPPDMPVCGCGKKARL-----KIITRKPITGSEEELKINPRSQSAKLRVAQKI 312          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_LISMH (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=mraW PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 52/117 (44.44%), Postives = 64/117 (54.70%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 347
            AVNDEL  +E SL      L PGGR+ VI+FHSLEDRI KQ F       +E  +G +    L  I D+   +            K+ T++PI PS EE   N R RSAKLRVI+KI
Sbjct:  212 AVNDELGAVEDSLEKALTLLKPGGRISVITFHSLEDRITKQLF-------QEATKGPDLPPGLPVIPDEYKPDF-----------KLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_LISMF (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Listeria monocytogenes serotype 4b (strain F2365) GN=mraW PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 52/117 (44.44%), Postives = 64/117 (54.70%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 347
            AVNDEL  +E SL      L PGGR+ VI+FHSLEDRI KQ F       +E  +G +    L  I D+   +            K+ T++PI PS EE   N R RSAKLRVI+KI
Sbjct:  212 AVNDELGAVEDSLEKALTLLKPGGRISVITFHSLEDRITKQLF-------QEATKGPDLPPGLPVIPDEYKPDF-----------KLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_HELMI (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=mraW PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.503e-13
Identity = 54/115 (46.96%), Postives = 63/115 (54.78%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 347
            AVNDEL  LE +L A  + LAPGGRL VISFHSLEDRIVK  F        E A G         D  +     R  +     KI+TK+P+  S EE R N R +SAKLR  +KI
Sbjct:  214 AVNDELGALEEALPAALEALAPGGRLAVISFHSLEDRIVKSFF-------AEQARG----CLCPPDFPVCACGNRPKV-----KIITKKPLVGSDEEMRANPRAQSAKLRAAEKI 312          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_LISW6 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=mraW PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.564e-13
Identity = 52/117 (44.44%), Postives = 63/117 (53.85%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 347
            AVNDEL  +E SL      L PGGR+ VI+FHSLEDRI K  F       +E  +G E    L  I D+   +            K+ T++PI PS EE   N R RSAKLRVI+KI
Sbjct:  212 AVNDELGAVEDSLEKALTLLKPGGRISVITFHSLEDRITKHLF-------QEATKGPELPPGLPVIPDEYKPDF-----------KLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_LISMO (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Listeria monocytogenes GN=mraW PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.564e-13
Identity = 51/117 (43.59%), Postives = 64/117 (54.70%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 347
            AVNDEL  +E SL      + PGGR+ VI+FHSLEDRI KQ F       +E  +G +    L  I D+   +            K+ T++PI PS EE   N R RSAKLRVI+KI
Sbjct:  212 AVNDELGAVEDSLEKALTLIKPGGRISVITFHSLEDRITKQLF-------QEATKGPDLPPGLPVIPDEYKPDF-----------KLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_BACHD (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Bacillus halodurans GN=mraW PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.564e-13
Identity = 49/116 (42.24%), Postives = 65/116 (56.03%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQK 344
            AVNDEL   E +L A  D  AP GR+ VI+FHSLEDRI K+ F       RE ++G +               +  I + +    K++TK+PI P+AEE  LN R RSAKLR+ +K
Sbjct:  212 AVNDELGAFEEALEAAIDLTAPKGRICVITFHSLEDRICKEMF-------REASKGPDV-----------PPGLPVIPEEYKATLKLITKKPIVPTAEEIELNNRARSAKLRIAEK 309          
The following BLAST results are available for this feature:
BLAST of DR908950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
MRAW_GEOTN1.359e-1442.98S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_GEOKA2.319e-1442.61S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_PROA26.746e-1441.23S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_HELMO8.811e-1446.96S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_LISMH1.503e-1344.44S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_LISMF1.503e-1344.44S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_HELMI1.503e-1346.96S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_LISW62.564e-1344.44S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_LISMO2.564e-1343.59S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_BACHD2.564e-1342.24S-adenosyl-L-methionine-dependent methyltransferas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_17078 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-40_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908950 ID=DR908950; Name=DR908950; organism=Citrus sinensis; type=EST; length=559bp
CCGCAGTGAATGATGAACTCAAAACTCTGGAGAGTTCTCTCCATGCTTGT
TTTGACTGTCTTGCTCCTGGGGGTAGGCTTGGCGTTATCTCTTTCCACAG
TTTGGAGGATAGAATTGTGAAACAAACGTTTCTCAGCATCATTGACCATA
ACAGAGAAGATGCAGAGGGGAATGAAGAAGAATTGAGAAATATCAGAGAT
GACAACATAAATGAAACATGGATTAGACAGATAATACAAGGTTGGAATGG
AAAAATTCTCACCAAGAGACCGATAACACCATCTGCAGAGGAGGAAAGAC
TTAATTGCCGTTGTAGGAGTGCTAAGCTCAGGGTGATTCAGAAGATTTGA
AGAGGAGTTGAACACAAACTGCCTGAGCCTGACAAATCAAGGAAAAACCA
CCAACCAACATAATCTGTATCATCAAACTATGCCTCTGGCTTTGGTGTTC
CACCATCCCATCATTTTTATTGCCATGTCTAATGTAGGATTCATGAGTAT
GTATAAGAAAATTTATCAAGATCAAACTATGACTTGACTTGGTTACTGAA
AAAAAAAAA
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