DR908949

Overview
NameDR908949
Unique NameDR908949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908949 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.804e-30
Identity = 71/186 (38.17%), Postives = 106/186 (56.99%), Query Frame = 1
Query:   25 TAISFLLLTFSTKP-LVGLAD----PLVDVHGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPLDVVQLSSDSERGTRLRFSMHD-KTSIINEDVDLNVRFST--ETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGRDRAMYKIVHCPSVCESCVSLCNDVGVSND 558
            TA+  LL  F++K    G+A+    P++D  G++++    YY++S+I               + CP  VVQ  SD + GT + FS  D K  ++    D+N+ F    +  C+  TVWR+D+YD S GKW++TT GV+G PG  TL +WFK E+ G     YK   CPSVC+SC +LC+D+G  +D
Sbjct:    5 TAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAG--VLGYKFRFCPSVCDSCTTLCSDIGRHSD 188          
BLAST of DR908949 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 5.961e-26
Identity = 65/181 (35.91%), Postives = 92/181 (50.83%), Query Frame = 1
Query:   43 LLTFSTKPLVGLAD----PLVDVHGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNE--LCPLDVVQLSSDSERGTRLRFSMHD-KTSIINEDVDLNVRFSTETRCN--EPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGRDRAMYKIVHCPSVCESCVSLCNDVGVSND 558
            LL  +  PL+  AD    P++D+ G K+    +YY+V  +              N   +CP  VVQ   + +    L F   + K  ++    DLN+ FS    C     TVWR+D YD S G++F+T GGV+GNPG +T+ +WFK E        YK+V CP+VC SC   C DVG+  D
Sbjct:   17 LLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEF-CGSGFYKLVFCPTVCGSCKVKCGDVGIYID 196          
BLAST of DR908949 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.282e-16
Identity = 54/159 (33.96%), Postives = 79/159 (49.69%), Query Frame = 1
Query:   85 PLVDVHGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNEL-CPLDVVQLSSDSERGTRLRFSMHDKTSIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGRDRAMYKIVHCPSVCESCVSLCNDVGVSND 558
            P+VD+ G  V    DY++VSAI              N+  CPL VVQ   D+          + K +I+ E VDLNV+F+    CNE T W+VD + P    W +T GG +G  G ++  + FK ++ G   + YK   CPS   + +  CN+V +  D
Sbjct:    5 PIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFDNGEPIIFSAIKNVKDNIVFESVDLNVKFNITINCNETTAWKVDRF-PGVIGWTVTLGGEKGYHGFESTHSMFKIKKAGLPFS-YKFHFCPSYPRTRLIPCNNVDIFFD 161          
BLAST of DR908949 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.989e-13
Identity = 44/159 (27.67%), Postives = 78/159 (49.06%), Query Frame = 1
Query:   79 ADPLVDVHGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPLDVVQLSSDSERGTRLRFSMHDKT-SIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGRDRAMYKIVHCPSVCESCVSLCNDVGVS 552
            A+ + D+ G  V    +YY+VSAI                +CP+ ++Q  SD + G  +RFS  +++   I  D +L + F  +  C E + W +       G+  +  GG E +P  + ++ +FK E++G     YK+V CP   +S    C+D+G++
Sbjct:    3 AEKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEFVEKPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLG--SLAYKLVFCP---KSSSGSCSDIGIN 153          
The following BLAST results are available for this feature:
BLAST of DR908949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ASP_THECC6.804e-3038.1721 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU5.961e-2635.91Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA4.282e-1633.96Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE1.989e-1327.67Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_17077 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-34_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908949 ID=DR908949; Name=DR908949; organism=Citrus sinensis; type=EST; length=559bp
AACAAAATGAGTACTCCTTTTGTAACTGCAATCTCCTTCCTTCTCCTTAC
CTTTTCCACAAAACCGCTTGTGGGACTCGCTGATCCTTTGGTTGATGTCC
ATGGCAACAAGGTCGAAGCATCCCGAGACTACTATTTGGTCTCAGCAATT
CGAGGAGCAGGCGGTGGCGGCCTCACCCTCTTCAGGGGCAGAAACGAACT
CTGCCCACTTGATGTTGTCCAACTAAGTTCCGACTCAGAAAGAGGAACCC
GTTTAAGATTCTCAATGCATGATAAAACTAGTATTATCAATGAAGATGTG
GATCTGAACGTGAGATTCTCCACAGAGACTCGCTGCAACGAACCAACAGT
ATGGAGAGTCGACAGCTATGATCCATCGAGAGGAAAATGGTTTATAACAA
CTGGTGGTGTTGAAGGAAACCCTGGAGCTCAAACTTTGAAAAACTGGTTT
AAGTTTGAGAGAATTGGAAGAGATCGAGCTATGTACAAGATTGTTCACTG
TCCTTCCGTTTGCGAATCCTGTGTATCTTTATGCAATGATGTTGGGGTTT
CTAACGATC
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