DR908940

Overview
NameDR908940
Unique NameDR908940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR908940 vs. ExPASy Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.989e-13
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 2 
Query:  176 CNGKSSWPELVGVNGEIAAATIQKENPNVHAIIILEGTPVTQDFRCXXXXXXXXXXXXXXXXPRIG 373
            C GKSSWP LVGV G +A A I+++NPNV A+I+ EGTPVT+DFRC                PRIG
Sbjct:    3 CPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPPRIG 68
[Close]
BLAST of DR908940 vs. ExPASy Swiss-Prot
Match: ICI_LINUS (Proteinase inhibitor OS=Linum usitatissimum PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.091e-11
Identity = 28/46 (60.87%), Postives = 40/46 (86.96%), Query Frame = 2 
Query:  176 CNGKSSWPELVGVNGEIAAATIQKENPNVHAIIILEGTPVTQDFRC 313
            C GK++WPELVG +G +AAAT+++EN NVHAI++ EG+ +T+DFRC
Sbjct:    4 CPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRC 49
The following BLAST results are available for this feature:
BLAST of DR908940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ITH5_CUCMA1.989e-1353.03Inhibitor of trypsin and hageman factor OS=Cucurbi... [more]
ICI_LINUS1.091e-1160.87Proteinase inhibitor OS=Linum usitatissimum PE=1 S... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_17068 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-21_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908940 ID=DR908940; Name=DR908940; organism=Citrus sinensis; type=EST; length=560bp
TGAAAATTAATCAACAATGAAGAACACAGTACTAGCACTAGCTTTCTTCG
TCTTTCTCTTTGCCTTTGCTGCAAAACCATCTTTGGCTGCTCGTCATGAG
CCGTTAGTGCTTCATTCGGATGGCCAGGAGCTCCTCATGGCTACCAGCAA
TTGCGATATCGTAACTCAATTTGAGTGTAATGGCAAGAGCTCATGGCCAG
AACTGGTTGGTGTAAACGGGGAGATTGCTGCTGCTACGATACAGAAAGAG
AATCCTAATGTTCATGCAATCATAATACTTGAGGGAACTCCAGTTACACA
AGATTTTCGTTGTGATCGGGTTCGAGTTGTGGTTGACAAATATGAGAAGG
TGGTTCAAGTTCCTCGGATTGGCTGAACTTCGACGATTATCTGCAATCAT
CATGGCTGGATGGATGGTCAGGATTAACTGCTTGTTTATAATCACTTAAC
TATGTATTAGTAAAATAAATGAACAAGTAGTGTTGTTTAATAAAGCATGC
ATGGATGTGCGTGATATCCAACAATCGGGTTCTACGAATGAGTGTATAAT
ACACCTTTAT
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