CN189852

Overview
NameCN189852
Unique NameCN189852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189852 vs. ExPASy Swiss-Prot
Match: DNPEP_PONAB (Aspartyl aminopeptidase OS=Pongo abelii GN=DNPEP PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19
Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = 2
Query:  587 LSKLCCQSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFCFREVASKHNLP 823
            +S  C      E+AI +SF++SADMAHA+HPNY+DKHE+NH+P  H G VIK N+ QRYA+NAV+    REVA+K  +P
Sbjct:  319 ISASCQHPTAFEEAIPKSFMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVANKVKVP 397          
BLAST of CN189852 vs. ExPASy Swiss-Prot
Match: DNPEP_HUMAN (Aspartyl aminopeptidase OS=Homo sapiens GN=DNPEP PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.914e-19
Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = 2
Query:  587 LSKLCCQSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFCFREVASKHNLP 823
            +S  C      E+AI +SF++SADMAHA+HPNY+DKHE+NH+P  H G VIK N+ QRYA+NAV+    REVA+K  +P
Sbjct:  323 ISASCQHPTAFEEAIPKSFMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVANKVKVP 401          
BLAST of CN189852 vs. ExPASy Swiss-Prot
Match: DNPEP_BOVIN (Aspartyl aminopeptidase OS=Bos taurus GN=DNPEP PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.495e-18
Identity = 41/68 (60.29%), Postives = 54/68 (79.41%), Query Frame = 2
Query:  620 EKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFCFREVASKHNLP 823
            E+AI +S+++SADMAHA+HPNY+DKHE+NH+P  H G VIK N+ QRYA+NAV+    REVAS   +P
Sbjct:  330 EEAIPKSYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVP 397          
BLAST of CN189852 vs. ExPASy Swiss-Prot
Match: DNPEP_MOUSE (Aspartyl aminopeptidase OS=Mus musculus GN=Dnpep PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.177e-18
Identity = 41/68 (60.29%), Postives = 53/68 (77.94%), Query Frame = 2
Query:  620 EKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFCFREVASKHNLP 823
            E+AI +SF++SADMAHA+HPNY DKHE+NH+P  H G VIK N+ QRYA+NAV+    REVA +  +P
Sbjct:  332 EEAIPKSFMISADMAHAVHPNYSDKHEENHRPSFHKGPVIKVNSKQRYASNAVSESMIREVAGQVGVP 399          
BLAST of CN189852 vs. ExPASy Swiss-Prot
Match: APEB_PSEAB (Probable M18 family aminopeptidase 2 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=apeB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.768e-16
Identity = 42/79 (53.16%), Postives = 53/79 (67.09%), Query Frame = 2
Query:  587 LSKLCCQSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFCFREVASKHNLP 823
            L +L  +     +AIQRS LVSAD AH +HPNY DKH+ NH P L+GG VIK N+NQRYATN+ T+  FR +     +P
Sbjct:  284 LRRLLPEGDAFSRAIQRSLLVSADNAHGVHPNYADKHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVP 362          
BLAST of CN189852 vs. ExPASy Swiss-Prot
Match: APEB_PSEAE (Probable M18 family aminopeptidase 2 OS=Pseudomonas aeruginosa GN=apeB PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.938e-16
Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 2
Query:  587 LSKLCCQSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFCFREVASKHNLP 823
            L +L  +     +AIQRS LVSAD AH +HPNY D+H+ NH P L+GG VIK N+NQRYATN+ T+  FR +     +P
Sbjct:  284 LRRLLPEGDAFSRAIQRSLLVSADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVP 362          
BLAST of CN189852 vs. ExPASy Swiss-Prot
Match: APEB_PSEA8 (Probable M18 family aminopeptidase 2 OS=Pseudomonas aeruginosa (strain LESB58) GN=apeB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.938e-16
Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 2
Query:  587 LSKLCCQSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFCFREVASKHNLP 823
            L +L  +     +AIQRS LVSAD AH +HPNY D+H+ NH P L+GG VIK N+NQRYATN+ T+  FR +     +P
Sbjct:  284 LRRLLPEGDAFSRAIQRSLLVSADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVP 362          
BLAST of CN189852 vs. ExPASy Swiss-Prot
Match: APEB_PSEA7 (Probable M18 family aminopeptidase 2 OS=Pseudomonas aeruginosa (strain PA7) GN=apeB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.938e-16
Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 2
Query:  587 LSKLCCQSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFCFREVASKHNLP 823
            L +L  +     +AIQRS LVSAD AH +HPNY D+H+ NH P L+GG VIK N+NQRYATN+ T+  FR +     +P
Sbjct:  284 LRRLLPEGDAFSRAIQRSLLVSADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVP 362          
BLAST of CN189852 vs. ExPASy Swiss-Prot
Match: DNPEP_CAEEL (Putative aspartyl aminopeptidase OS=Caenorhabditis elegans GN=F01F1.9 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.717e-16
Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = 2
Query:  620 EKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFCFREVASKHNLP 823
            E+AI +S L+SAD AHA HPNY  KHE+NH+P  HGG+V+K N NQRYAT + T    ++VA +  +P
Sbjct:  331 EEAIGKSMLISADQAHATHPNYSAKHEENHRPAFHGGVVVKVNVNQRYATTSTTHAALKQVAFEAQVP 398          
BLAST of CN189852 vs. ExPASy Swiss-Prot
Match: APEB_PSEU5 (Probable M18 family aminopeptidase 2 OS=Pseudomonas stutzeri (strain A1501) GN=apeB PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.717e-16
Identity = 40/79 (50.63%), Postives = 56/79 (70.89%), Query Frame = 2
Query:  587 LSKLCCQSKLIEKAIQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKHNANQRYATNAVTSFCFREVASKHNLP 823
            L +L  +    ++AI RS L+SAD AHA+HPNY DKH+ NH PKL+ G VIK N+NQRYAT++ T+  FR +  ++ +P
Sbjct:  284 LRRLLPEEDDFQRAINRSLLISADNAHAVHPNYADKHDGNHGPKLNAGPVIKVNSNQRYATSSETAGFFRHLCLENEVP 362          
The following BLAST results are available for this feature:
BLAST of CN189852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
DNPEP_PONAB2.914e-1955.70Aspartyl aminopeptidase OS=Pongo abelii GN=DNPEP P... [more]
DNPEP_HUMAN2.914e-1955.70Aspartyl aminopeptidase OS=Homo sapiens GN=DNPEP P... [more]
DNPEP_BOVIN5.495e-1860.29Aspartyl aminopeptidase OS=Bos taurus GN=DNPEP PE=... [more]
DNPEP_MOUSE7.177e-1860.29Aspartyl aminopeptidase OS=Mus musculus GN=Dnpep P... [more]
APEB_PSEAB1.768e-1653.16Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSEAE3.938e-1651.90Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSEA83.938e-1651.90Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
APEB_PSEA73.938e-1651.90Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]
DNPEP_CAEEL6.717e-1654.41Putative aspartyl aminopeptidase OS=Caenorhabditis... [more]
APEB_PSEU56.717e-1650.63Probable M18 family aminopeptidase 2 OS=Pseudomona... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002I09_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002I09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189852 ID=CN189852; Name=CN189852; organism=Citrus sinensis; type=EST; length=823bp
TTTTTTTTTTTTTTTTTAGCTGCCAGATAAAAATATATAAATTCCAAATA
CGATATGACTACATAGATCCAATACGTCCTAATACCAATCAAAAATCAAC
AAGAGCTATACATACAAAAAACCATGGTTAATAACATATAGCAAAGCAAA
TAGTGAGAATTTGCCTAATTACTACTAGATAGAGATGTTATGATCTGATC
CAGACTACATCAACGACCTAGAGGGTACTTTCCGTAATCATTGTCCCTCC
GGCTGTTCCTGAACGCACAGCAGCCAATGGAGTAAACGATGATAAGCACT
ATGAGGAAGACAATGTTGACAATGGCAACCTTCTTCCAGTCACTCTTGAG
TTGGTCCAGCAGGCCAGCCTTGCATGATTGGCAGTTGTAGCACAAAGTAC
TTGCATCATTCCCCCATGCACCACAGTCGGGATTGGTGCTAGATGTGTTT
CCCTTAGTCCATTGGGTTGGACCGGCATAATTAAATCCACAGTCATTAGA
TGGCTTGCAGCAACCAGACTGAACAGAAGACAAGTGCTCGGAATAAAACT
GCTCGACGGTGTCATTAAGATACTTATCATGAAAGCTTGAGCAAACTTTG
CTGTCAATCAAAGCTGATTGAGAAGGCAATCCAGAGGAGTTTCCTTGTTT
CTGCTGATATGGCACATGCCCTACACCCTAATTATATGGACAAACATGAA
GACAATCATCAGCCAAAGTTGCATGGAGGACTTGTCATCAAGCACAATGC
AAATCAACGCTATGCAACCAATGCCGTGACATCCTTTTGTTTTAGGGAGG
TAGCCTCAAAGCATAACCTTCCT
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