CN189824
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189824 vs. ExPASy Swiss-Prot
Match: COG3_HUMAN (Conserved oligomeric Golgi complex subunit 3 OS=Homo sapiens GN=COG3 PE=1 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 4.156e-35 Identity = 76/213 (35.68%), Postives = 133/213 (62.44%), Query Frame = 2 Query: 2 REKQRLIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQSRALGMIRSHVLSVLKSASSQVQAAIRSSGGSKTSVSEGVEASLIYVRFKAAASELKPVLEEIESRSSK-KEYVQILEECHKLYCEQRLSLVKGIVQQRISEFSKKETLP--SLTRSGCAYLMQVCQLEHQLFDHFF 631 +E+ L++ AE +Q KL YF+ELE I SP ++V + F +L +LD+CI Y+ +P + + +YLLKF+Q S+AL +++++ ++ L++ +SQ+ SS + + +L YV+F+AAA +++ ++E+IE RS K EY Q+L + H+ Y +QR L+ + ++E + + +L RSGCA+++ VCQ EHQL++ FF Sbjct: 181 KEQSELVDLAENIQQKLSYFNELETINTKLNSPTLSVNSDGFIPMLAKLDDCITYISSHPNFKDYPIYLLKFKQCLSKALHLMKTYTVNTLQTLTSQLLKRDPSSVPNADNA-----FTLFYVKFRAAAPKVRTLIEQIELRSEKIPEYQQLLNDIHQCYLDQRELLLGPSIACTVAELTSQNNRDHCALVRSGCAFMVHVCQDEHQLYNEFF 388
BLAST of CN189824 vs. ExPASy Swiss-Prot
Match: COG3_MOUSE (Conserved oligomeric Golgi complex subunit 3 OS=Mus musculus GN=Cog3 PE=1 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 3.518e-34 Identity = 75/213 (35.21%), Postives = 131/213 (61.50%), Query Frame = 2 Query: 2 REKQRLIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQSRALGMIRSHVLSVLKSASSQVQAAIRSSGGSKTSVSEGVEASLIYVRFKAAASELKPVLEEIESRSSK-KEYVQILEECHKLYCEQRLSLVKGIVQQRISEFSKKETLP--SLTRSGCAYLMQVCQLEHQLFDHFF 631 +E+ L + AE +Q KL YF+ELE I SP ++V + F +L +LD+CI Y+ +P + + VYLLKF+Q S+AL +++++ ++ L++ ++Q+ SS + + +L YV+F+AAA +++ ++E+IE RS K EY +L + H+ Y +QR L+ + ++E + + +L RSGCA+++ VCQ EHQL++ FF Sbjct: 173 KEQSELADLAEHIQQKLSYFNELETINTKLNSPTLSVNSEGFIPMLAKLDDCITYISSHPNFKDYPVYLLKFKQCLSKALHLMKTYTVNTLQTLTNQLLKRDPSSVPNADNA-----FTLFYVKFRAAAPKVRTLIEQIEQRSEKIPEYQHLLNDIHQCYLDQRELLLGPSIAYTVTELTSQNNRDHCALVRSGCAFMVHVCQDEHQLYNEFF 380
BLAST of CN189824 vs. ExPASy Swiss-Prot
Match: COG3_AEDAE (Conserved oligomeric Golgi complex subunit 3 OS=Aedes aegypti GN=Cog3 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.082e-30 Identity = 74/218 (33.94%), Postives = 128/218 (58.72%), Query Frame = 2 Query: 2 REKQRLIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQSRALGMIRSHVLSVLKSASSQVQAAIRSSGGSKTSVSEGVEA--SLIYVRFKAAASELKPVLEEIESRSSKK-EYVQILEECHKLYCEQRLSLVKGIVQQRISEFSKKETLP--SLTRSGCAYLMQVCQLEHQLFDHFFPSS 640 +++ +L E E ++ +LKYF + E+I +P +V N F +L +DEC+ Y+ NP ++E+ Y +K+R S+A M+R++V ++L +A++Q+ R S+T + +G EA +L Y +F+A+A +K + IE R + EY Q+L H+ + R +++ V+Q I + SKK +L RS CA+++ VCQ EH+LF FF +S Sbjct: 163 QDQTKLNEIGEEIRRRLKYFSQAESIYQRLQNPTFSVSNDTFVEILNTIDECLEYMRVNPGFSEAFAYGVKYRNCLSKATQMMRNYVSNILTNATAQILGPQR----SETGMEQGSEAAFALYYGKFQASAPRVKRITGMIEGRLDRSVEYEQLLAALHQQFLANRATIMSSGVEQAIRDLSKKHKGDHCALVRSACAFMVHVCQDEHRLFFQFFTNS 376
BLAST of CN189824 vs. ExPASy Swiss-Prot
Match: COG3_DROME (Conserved oligomeric Golgi complex subunit 3 OS=Drosophila melanogaster GN=Cog3 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.166e-27 Identity = 69/213 (32.39%), Postives = 122/213 (57.28%), Query Frame = 2 Query: 5 EKQRLIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQSRALGMIRSHVLSVLKSAS-SQVQAAIRSSGGSKTSVSEGVEASLIYVRFKAAASELKPVLEEIESRSSKK-EYVQILEECHKLYCEQRLSLVKGIVQQRIS--EFSKKETLPSLTRSGCAYLMQVCQLEHQLFDHFF 631 E++RL E + +Q +L YF ++E + SP ++V + F L ++DEC+ Y+E NP++ +++ Y +K+RQ ++A G++R++V SV+ A+ + + S + +L Y +++ AA+++K V + IESRS +Y Q++ + + Y QR S++ V I + + K SLTRS CA+L+ VCQ E +LF FF Sbjct: 169 EQERLQELSHEIQRRLHYFSQVELLNQRLQSPTLSVASEAFRECLNKIDECLNYIEENPKFKDAAAYNVKYRQCLAKASGLVRNYVTSVINQATEATLHPKNNMPDASAALKAPDAAFALYYGKYQTAAAKVKRVAQLIESRSEHSLDYAQLMADLQQHYLAQRASVMSPAVNLSIQNVKVAHKGDHCSLTRSACAFLVHVCQDEQRLFYQFF 381
BLAST of CN189824 vs. ExPASy Swiss-Prot
Match: COG3_DROPS (Conserved oligomeric Golgi complex subunit 3 OS=Drosophila pseudoobscura pseudoobscura GN=Cog3 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.700e-26 Identity = 66/213 (30.99%), Postives = 124/213 (58.22%), Query Frame = 2 Query: 5 EKQRLIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQSRALGMIRSHVLSVLKSASSQVQAAIRSSGGSKTSVSEGVEA-SLIYVRFKAAASELKPVLEEIESR-SSKKEYVQILEECHKLYCEQRLSLVKGIVQQRIS--EFSKKETLPSLTRSGCAYLMQVCQLEHQLFDHFF 631 E+++L + + +Q +L YF ++E + SP ++V + F L ++DEC+ Y+E NP++ +++ Y +K+RQ ++A G++R++V SV+ A+ S+ S +++ A +L Y +++ AA+++K V++ IE+R +Y Q++ + + Y QR S++ V I + + K SLTRS C +L+ VCQ E +LF FF Sbjct: 171 EQEKLQDLSNEIQRRLHYFSQVELLNQRLQSPTLSVASEAFRECLNKIDECLNYIEENPKFKDAATYNVKYRQCLAKASGLVRNYVTSVINQATEATLHPKNSATDSSSALQAPDAAFALYYGKYQTAAAKVKRVVQLIETRLEHSNDYTQLMTDLQQHYLAQRASVMSPAVNLSIQNVKTAHKGDHCSLTRSACGFLVHVCQDEQRLFYQFF 383
BLAST of CN189824 vs. ExPASy Swiss-Prot
Match: COG3_DICDI (Conserved oligomeric Golgi complex subunit 3 OS=Dictyostelium discoideum GN=cog3 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.413e-20 Identity = 63/231 (27.27%), Postives = 123/231 (53.25%), Query Frame = 2 Query: 5 EKQRLIEFAEAVQSKLKYFDELENIAASFYSPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQSRALGMIRSHVLSVLK-------SASSQVQAAI---------RSSGGSK--TSVSEGVEASLIY----VRFKAAASELKPVLEEIESRSSKKEYVQILEECHKLYCEQRLSLVKGIVQQRISEFSKKETLPSLTRSGCAYLMQVCQLEHQLFDHFF 631 E+ +L A+++ KLK++++LE F + N NV + F L+ L+ I +++ N + ES+ YL ++ + SRALG+I+ ++ S LK +A Q++ ++ SSGGS S + + ++ +RF+A A +L+P+ E+E R+ Y+ L + +Y R S++ I+ +++ SK + S+ RS +++Q + E+Q++ +FF Sbjct: 183 EELKLRYIAQSIHDKLKFYNQLEIQTKKFNTTNFNVTDSTFLTSLENLENSINFMKSNSTFMESNKYLTQYGFIFSRALGLIKDYISSNLKILSRDIINAQKQLKTSVSTPTSPQLQSSSGGSPLINDFSNSTDFNDLFQHSNIRFRAFAPKLRPLCLELEKRAI-GPYLSYLYDTQNIYFNNRRSILSLIMFEKLQSLSKMTDISSMIRSSSLFMIQFYENEYQIYSNFF 412
BLAST of CN189824 vs. ExPASy Swiss-Prot
Match: COG3_YEAST (Conserved oligomeric Golgi complex subunit 3 OS=Saccharomyces cerevisiae GN=COG3 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.658e-15 Identity = 61/224 (27.23%), Postives = 105/224 (46.88%), Query Frame = 2 Query: 5 EKQ-RLIEFAEAVQSKLKYFDELENIAASFY---SPNMNVGNGNFFHLLKRLDECILYVEGNPQYAESSVYLLKFRQLQSRALGMIRSHVLSVLKSASSQVQAAIRSSGGSKTSVSEGVEASLIYVRFKAAASELKPVLEEIESRSSKKEYVQ-------ILEECHKLYCEQRLSLVKGIVQQRISEF---SKKETLPSLTRSGCAYLMQVCQLEHQLFDHFFP 634 EKQ +L E++ L YF+ L+ I SP + V +F +L +DE + +++ N +++ Y +KF+Q RA +I + ++LK + ++ ++ S T + + +Y +F A K + EI RS++K Y + IL EC Y + RL L+ ++ I E K + L + G Y Q+C E++LF FFP Sbjct: 137 EKQSKLSNLTESIPKALHYFEVLDPIMRRLNHATSPAI-VKKSSFTTMLATIDESLRFLDENSDLKDAAAYRIKFKQCLIRACELISHFLTNLLKQTNQEILDKTKNK-NSLTGLPSTTRDAFLYSKFYTIADTFKIQVSEIVKRSNEKAYNKYHDELNSILYECFNHYFQTRLRLLTPVIWSHIDEIVVKDKDQGLVKFIQDGKVYFQQLCADEYKLFVEFFP 358 The following BLAST results are available for this feature:
BLAST of CN189824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189824 ID=CN189824; Name=CN189824; organism=Citrus sinensis; type=EST; length=642bpback to top |