CN189815

Overview
NameCN189815
Unique NameCN189815
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length617
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189815 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.223e-57
Identity = 108/140 (77.14%), Postives = 120/140 (85.71%), Query Frame = -3
Query:  196 SECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVSGQANNAYIFPGFGLGLVIFGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFFNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 615
            SECTAEEAYTW++GRAIFASGSPFDP EYNGK FV GQANNAYIFPG G+GLVI GAIRVHD+MLLAASEALA+QVT+ENF+KGLIYPPF NIR             AYELG+ATRLP+P+NLVK AESCMY+PVYR+YR
Sbjct:  452 SECTAEEAYTWTQGRAIFASGSPFDPVEYNGKTFVPGQANNAYIFPGLGMGLVISGAIRVHDEMLLAASEALARQVTQENFDKGLIYPPFSNIRKISAHIAANVAAKAYELGLATRLPQPENLVKYAESCMYSPVYRSYR 591          
BLAST of CN189815 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 7.417e-55
Identity = 103/140 (73.57%), Postives = 118/140 (84.29%), Query Frame = -3
Query:  196 SECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVSGQANNAYIFPGFGLGLVIFGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFFNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 615
            SECTAE+AYTWS+GR IFASGSPF P EYNGKV+VSGQ+NNAYIFPGFGLGL+I GAIRVHD+MLLAASEALA+QVT+E+F+ GLIYPPF NIR             AYELG+A+RLP+P+NLV  AESCMY+P YRNYR
Sbjct:  508 SECTAEQAYTWSEGRTIFASGSPFAPVEYNGKVYVSGQSNNAYIFPGFGLGLIISGAIRVHDEMLLAASEALAEQVTQEHFDNGLIYPPFTNIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRNYR 647          
BLAST of CN189815 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 6.279e-54
Identity = 101/140 (72.14%), Postives = 115/140 (82.14%), Query Frame = -3
Query:  196 SECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVSGQANNAYIFPGFGLGLVIFGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFFNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 615
            SECTAEEAY WS+GRA+FASGSPFDP EYNGK+ V GQ+NNAYIFPGFGLG+VI GA+RVH+DMLLAASE LA Q T+ENFEKG I+PPF NIR             AYELG+ATRLP+P++L K AESCMYTPVYR+YR
Sbjct:  500 SECTAEEAYNWSQGRAVFASGSPFDPVEYNGKIHVPGQSNNAYIFPGFGLGVVISGAVRVHEDMLLAASETLADQATQENFEKGSIFPPFTNIRKISARIAASVAAKAYELGLATRLPQPRDLEKYAESCMYTPVYRSYR 639          
BLAST of CN189815 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.399e-53
Identity = 102/140 (72.86%), Postives = 118/140 (84.29%), Query Frame = -3
Query:  196 SECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVSGQANNAYIFPGFGLGLVIFGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFFNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 615
            SECTAE+AYTWS+GRAIFASGSPF P EYNGK++VSGQANNAYIFPGFGLGL+I GAIRVHDDMLLAASEA A+QVT+E+F+KGLI+PPF +IR             AYELG+A+RLP+P+NLV  AESCMY+P YR YR
Sbjct:  509 SECTAEQAYTWSEGRAIFASGSPFKPVEYNGKLYVSGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEAPAEQVTQEHFDKGLIFPPFTSIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRIYR 648          
BLAST of CN189815 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.116e-53
Identity = 102/140 (72.86%), Postives = 116/140 (82.86%), Query Frame = -3
Query:  196 SECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVSGQANNAYIFPGFGLGLVIFGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFFNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 615
            SECTAEEAYTWSKGRAIFASGSPFDP EY GK+FV GQANNAYIFPGFGLGL++ GAIRV D+MLLAASEALA QV+EEN++KGLIYPPF NIR             AY+LG+A+ L RP++LVK AESCMY+P YR+YR
Sbjct:  450 SECTAEEAYTWSKGRAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIMSGAIRVRDEMLLAASEALAAQVSEENYDKGLIYPPFTNIRKISANIAAKVAAKAYDLGLASHLKRPKDLVKYAESCMYSPGYRSYR 589          
BLAST of CN189815 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 207.608 bits (527), Expect = 4.070e-53
Identity = 103/140 (73.57%), Postives = 112/140 (80.00%), Query Frame = -3
Query:  196 SECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVSGQANNAYIFPGFGLGLVIFGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFFNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 615
            SECTA+EAYTW+KG+AIFASGSPFDP EY GKVFV GQ+NNAYIFPG GLGLVI GAIRVHDDMLLAA+EALA Q+ EE   KGLIYPP  NIR             AYELG+ATRLPRP+NLVK AESCMY+P YR YR
Sbjct:  452 SECTAQEAYTWTKGKAIFASGSPFDPVEYEGKVFVPGQSNNAYIFPGLGLGLVISGAIRVHDDMLLAAAEALAGQIKEEYLAKGLIYPPLSNIRKISVQIAANVAAKAYELGLATRLPRPENLVKHAESCMYSPAYRYYR 591          
BLAST of CN189815 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.638e-52
Identity = 101/140 (72.14%), Postives = 113/140 (80.71%), Query Frame = -3
Query:  196 SECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVSGQANNAYIFPGFGLGLVIFGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFFNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 615
            SECTAEEAYTWS+G AIFASGSPFDP EY G+ FV GQANNAYIFPGFGLGL++ GAIRVHDDMLLAASEALA QVT E+F KGLIYPPF +IR             AYELG+A+RLP+P +LVK AESCMY P YR++R
Sbjct:  446 SECTAEEAYTWSQGHAIFASGSPFDPVEYEGRTFVPGQANNAYIFPGFGLGLIMCGAIRVHDDMLLAASEALASQVTGEHFIKGLIYPPFKDIRKISAHIAAGVAAKAYELGLASRLPQPADLVKFAESCMYNPTYRSFR 585          
BLAST of CN189815 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 5.877e-52
Identity = 99/140 (70.71%), Postives = 113/140 (80.71%), Query Frame = -3
Query:  196 SECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVSGQANNAYIFPGFGLGLVIFGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFFNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 615
            SECTAE+AYTWS+GR+IFASGSPF P EY GK FV GQ+NNAYIFPG GLGLVI GA+RVH+DMLLAAS+ALA Q T++NFEKG I+PPF +IR             AYELG+ATRLP P +LVK AE+CMYTPVYRNYR
Sbjct:  497 SECTAEQAYTWSQGRSIFASGSPFAPVEYEGKTFVPGQSNNAYIFPGLGLGLVISGAVRVHEDMLLAASKALADQATQDNFEKGSIFPPFTSIRKISAHIAAAVAGKAYELGLATRLPPPSDLVKYAENCMYTPVYRNYR 636          
BLAST of CN189815 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.233e-51
Identity = 101/140 (72.14%), Postives = 114/140 (81.43%), Query Frame = -3
Query:  196 SECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVSGQANNAYIFPGFGLGLVIFGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFFNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVYRNYR 615
            SECTAEEAY+WS+GRAIFASGSPF P EYNGKV+ SGQANNAYIFPGFGLGL+I GAIRVHDDMLL ASEALA +V++ENFEKG   PPF NIR             AYELG+ATRLP+P++LV  AESCMY+P YR+YR
Sbjct:  435 SECTAEEAYSWSEGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLVASEALADEVSQENFEKGTHIPPFSNIR-KISAHIAKVAAKAYELGLATRLPQPKDLVAYAESCMYSPAYRSYR 573          
BLAST of CN189815 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.486e-26
Identity = 64/136 (47.06%), Postives = 78/136 (57.35%), Query Frame = -3
Query:  208 SECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVSGQANNAYIFPGFGLGLVIFGAIRVHDDMLLAASEALAKQVTEENFEKGLIYPPFFNIRXXXXXXXXXXXXXAYELGVATRLPRPQNLVKCAESCMYTPVY 615
            +ECTAE+AY W+ GR IFASGSPF P EY GK FV GQ NN YIFPG GL   +  A  V D M++ A++ LA  V +     G IYP   +IR             AYE G+A +LPRP N+    +S  Y P Y
Sbjct:  405 AECTAEQAYQWTDGRCIFASGSPFKPVEYKGKTFVPGQGNNMYIFPGLGLAASVCEAKHVTDAMIITAAKTLASFVEDSEVLTGKIYPGLQHIREISTRIAVKVIEKAYEEGMA-QLPRPDNIEALVKSRQYVPSY 539          
The following BLAST results are available for this feature:
BLAST of CN189815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
MAOX_VITVI1.223e-5777.14NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOC_FLAPR7.417e-5573.57NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_ORYSJ6.279e-5472.14NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_FLATR1.399e-5372.86NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_PHAVU3.116e-5372.86NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOX_POPTR4.070e-5373.57NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOX_MESCR2.638e-5272.14NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_MAIZE5.877e-5270.71NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOC_SOLLC2.233e-5172.14NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOX_DICDI2.486e-2647.06NADP-dependent malic enzyme OS=Dictyostelium disco... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0002H12_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189815 ID=CN189815; Name=CN189815; organism=Citrus sinensis; type=EST; length=617bp
TTTTTTTTTTTTTTTTTCAGGAAGAATATTTTTCAACCATGTAGGCAGTG
TTCCAACACCTTCATTTGATAAGTACACATATACAGCAATACTTACACAA
TTCCAAAAGCCACCATAACACACCAAAACAAGTTATTTGACATTATTTTT
GCTTAAAGACACTCAGCGGAAACAGAAATTTTGGCAAAACATTTAACGAT
AGTTTCGGTAGACAGGGGTATACATGCAACTTTCAGCGCACTTCACTAAA
TTCTGAGGTCGAGGGAGACGCGTAGCCACGCCTAGTTCATATGCCTTAGC
AGCAACATTAGCAGCTATATTGGCTGAAATTTTTCTAATATTAAAAAATG
GTGGGTAGATCAATCCCTTCTCAAAGTTCTCTTCTGTCACTTGTTTTGCC
AAGGCTTCCGAGGCTGCCAAAAGCATGTCGTCATGTACCCGAATTGCTCC
AAAGATGACCAAACCCAAACCAAATCCAGGGAAGATGTAAGCATTGTTGG
CCTGGCCAGAAACAAAAACTTTTCCATTGTATTCAAAAGGATCAAATGGA
CTTCCACTAGCGAAAATTGCACGACCCTTACTCCAAGTGTAAGCTTCTTC
AGCTGTACATTCTGACT
back to top