CN189813

Overview
NameCN189813
Unique NameCN189813
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length420
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189813 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.371e-41
Identity = 85/94 (90.43%), Postives = 85/94 (90.43%), Query Frame = 3
Query:   51 MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI 332
            MFGR PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDI
Sbjct:    1 MFGR-PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE-GMGGGGGHDPFDI 92          
BLAST of CN189813 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 6.897e-41
Identity = 77/94 (81.91%), Postives = 83/94 (88.30%), Query Frame = 3
Query:   51 MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI 332
            MFGRAPKKSDNTKYYE+LGVSKNA+ +DLKKAYRKAAIKNHPDKGGDPEKFKE+ QAYEVL+DPEKREIYDQYGE+ LKE        HDPFDI
Sbjct:    1 MFGRAPKKSDNTKYYEVLGVSKNATPEDLKKAYRKAAIKNHPDKGGDPEKFKEIGQAYEVLNDPEKREIYDQYGEEGLKEGMGGGGGVHDPFDI 94          
BLAST of CN189813 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 1.176e-40
Identity = 84/124 (67.74%), Postives = 89/124 (71.77%), Query Frame = 3
Query:   51 MFGRAP-KKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHP 419
            MFGR P KKSDNTK+YEILGV K+AS +DLKKAY+KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDI                       EDV+HP
Sbjct:    1 MFGRGPSKKSDNTKFYEILGVPKSASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGGPFGGNTSRQRRQRRGEDVVHP 124          
BLAST of CN189813 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.423e-40
Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 3
Query:   51 MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI 332
            MFGRAPKKSD+T+YYEILGV K+AS +DLKKAY+KAAIKNHPDKGGDPEKFKELA AYEVLSDPEKREIYDQYGEDALKE        HDPFDI
Sbjct:    1 MFGRAPKKSDSTRYYEILGVPKDASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGGGMHDPFDI 94          
BLAST of CN189813 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 1.101e-38
Identity = 77/95 (81.05%), Postives = 82/95 (86.32%), Query Frame = 3
Query:   51 MFGRAP-KKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI 332
            MFGR P +KSDNTK+YEILGV K A+ +DLKKAY+KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE        HDPFDI
Sbjct:    1 MFGRGPSRKSDNTKFYEILGVPKTAAPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDI 95          
BLAST of CN189813 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.883e-30
Identity = 63/73 (86.30%), Postives = 64/73 (87.67%), Query Frame = 3
Query:  114 KNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI 332
            KNAS DDLKKAYRKAAIKNHPDKGGDPEKFKELAQAY+VLSDPEKREIYDQYGEDALKE        HDPFDI
Sbjct:    1 KNASPDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYDVLSDPEKREIYDQYGEDALKEGMGGGGGDHDPFDI 73          
BLAST of CN189813 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.766e-20
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = 3
Query:   90 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 287
            YY ILG+ K AS +D+KKAYRK A+K HPDK   P   EKFKE+A+AYEVLSDP+KREIYDQ+GE+ LK
Sbjct:    5 YYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLK 73          
BLAST of CN189813 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.766e-20
Identity = 46/69 (66.67%), Postives = 56/69 (81.16%), Query Frame = 3
Query:   90 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 287
            YY ILG+ K A+ +D+KKAYRK A+K HPDK   P   EKFKE+A+AYEVLSDP+KREIYDQ+GE+ LK
Sbjct:    5 YYHILGIDKGATDEDVKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLK 73          
BLAST of CN189813 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.766e-20
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = 3
Query:   90 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK 287
            YY ILG+ K AS +D+KKAYRK A+K HPDK   P   EKFKE+A+AYEVLSDP+KREIYDQ+GE+ LK
Sbjct:    5 YYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLK 73          
BLAST of CN189813 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.766e-20
Identity = 49/84 (58.33%), Postives = 61/84 (72.62%), Query Frame = 3
Query:   84 TKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP-EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI 332
            T+YY+ILGV  +AS +++KKAYRK A+K HPDK  D  EKFK ++QAYEVLSDP+KR+IYDQ GE A+KE          P DI
Sbjct:    5 TQYYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDIYDQGGEQAIKEGGSGSPSFSSPMDI 88          
The following BLAST results are available for this feature:
BLAST of CN189813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJH_CUCSA2.371e-4190.43DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH2_ALLPO6.897e-4181.91DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNAJ3_ARATH1.176e-4067.74Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH_ATRNU3.423e-4082.98DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ2_ARATH1.101e-3881.05Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJH1_ALLPO1.883e-3086.30DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJB4_PONAB1.766e-2068.12DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_MOUSE1.766e-2066.67DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DNJB4_HUMAN1.766e-2068.12DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJA4_MOUSE1.766e-2058.33DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002H11_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189813 ID=CN189813; Name=CN189813; organism=Citrus sinensis; type=EST; length=420bp
GACGTTCCGTCTCGCGTCTACTCTGAAGATCTGAAATTTTTTAGTACAAG
ATGTTCGGAAGAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAGAT
TCTCGGAGTCTCAAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTATA
GGAAAGCCGCCATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGAAG
TTTAAAGAGTTGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAGCG
TGAAATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGGTG
GTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTCGGT
GGCAGCCCATTTGGTGGTGGGAGCAGCAGAGGAAGAAGGCTAAGGAGGGG
AGAGGATGTTATCCATCCCC
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