DR908884

Overview
NameDR908884
Unique NameDR908884
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DR908884 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.496e-16
Identity = 36/47 (76.60%), Postives = 42/47 (89.36%), Query Frame = 3 
Query:    3 VWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYDWLYSGETRSKHH 143
            VWRSVFHPGSNL+++ +G +VFD P  PNSPTVYDW+YSGETRSKHH
Sbjct:   65 VWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYDWMYSGETRSKHH 110
The following BLAST results are available for this feature:
BLAST of DR908884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN7.496e-1676.60Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_17012 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-53_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908884 ID=DR908884; Name=DR908884; organism=Citrus sinensis; type=EST; length=568bp
ACGTGTGGAGGAGCGTGTTTCACCCCGGTAGCAACCTTGCTACTAGGGGT
ATCGGTGCAGAGGTCTTTGACAAGCCCACACATCCTAACTCTCCCACTGT
TTATGACTGGCTTTACAGTGGGGAGACTAGGAGCAAGCATCATCACTAGT
GGATGATACGCTACAGCGATGTAAATGAATGTGATGGGTCACCAACTCAC
CGGATGAGTTGCCTGTAGTCTGTAGATAGTGTCGTTTCGTTTTGGATTTC
GCAACGTGTCCTTGTCGTTTTGTTAATGCTATTTGTATTACGTGTCCTTC
CTATCTAAAGTTTGGTTTTAAAATGCTGCTGACTAAAAGTAAATTAAAGA
CTGTGATGTTTTTATATCATATAATTTAATAATTGTATGTGATGTGAGGA
TTGCTAAGCTGTGGGCGGAGATGAAAGGTTGCTGGTTTTTGGGTTTAGGA
CATGTTTTTGATTGTCATTTTGTAAGAGCCAAGATCATCCCTTCGTGGAC
GGTCGTGATGAGCATATATGTTTTATTATTAATAAATAAGTTGCTTCTCT
GAATGTTTAAAAAAAAAA
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