CN189785

Overview
NameCN189785
Unique NameCN189785
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189785 vs. ExPASy Swiss-Prot
Match: PDC1_PEA (Pyruvate decarboxylase isozyme 1 OS=Pisum sativum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 436.417 bits (1121), Expect = 8.466e-122
Identity = 216/258 (83.72%), Postives = 231/258 (89.53%), Query Frame = 3
Query:   24 LHMDTANAMGSTGQPGSAPA--PVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKA 791
            +  +T    GST  P SAP+  P+R  +  GT+GRHLARRLVEIG +DVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGY R++GVGACVVTFTVGGLS+LNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDF+QEL+CFQ ITC QAVVNNL DAHELIDTAISTALKESKPVYISI CNLP IPHPTFARDPVPFFLAP+VSNQ GLEAAVE  A FLNKAVKPV+VGGP +RVAKAQKA
Sbjct:    1 METETETPNGSTPCPTSAPSAIPLRPSSCDGTMGRHLARRLVEIGVRDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYGRAKGVGACVVTFTVGGLSILNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELQCFQTITCFQAVVNNLDDAHELIDTAISTALKESKPVYISIGCNLPAIPHPTFARDPVPFFLAPRVSNQAGLEAAVEEAAAFLNKAVKPVIVGGPKLRVAKAQKA 258          
BLAST of CN189785 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSJ (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. japonica GN=PDC2 PE=2 SV=1)

HSP 1 Score: 416.387 bits (1069), Expect = 9.066e-116
Identity = 205/256 (80.08%), Postives = 225/256 (87.89%), Query Frame = 3
Query:   51 GSTGQPGSA---------PAPVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKA 791
            G+ G P SA         PAPV  G +  +LGRHLARRLV++G  DVF+VPGDFNLTLLDHLIAEP L LVGCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLPVICI GGPNSNDYGTNRILHHTIGLPDF+QELRCFQ +TC QAVV NL DAHE IDTAI+TAL+ESKPVY+SISCNLPG+PHPTF+RDPVPFFLAP++SN++GLEAAVEAT +FLNKAVKPVLVGGP +RVAKA KA
Sbjct:   18 GAVGCPASAVGCPMTSARPAPVSAGEA--SLGRHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRLVGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIAGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCHQAVVTNLEDAHEQIDTAIATALRESKPVYLSISCNLPGLPHPTFSRDPVPFFLAPRLSNKMGLEAAVEATVEFLNKAVKPVLVGGPKLRVAKAGKA 271          
BLAST of CN189785 vs. ExPASy Swiss-Prot
Match: PDC2_ORYSI (Pyruvate decarboxylase isozyme 2 OS=Oryza sativa subsp. indica GN=PDC2 PE=2 SV=2)

HSP 1 Score: 416.387 bits (1069), Expect = 9.066e-116
Identity = 205/256 (80.08%), Postives = 225/256 (87.89%), Query Frame = 3
Query:   51 GSTGQPGSA---------PAPVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKA 791
            G+ G P SA         PAPV  G +  +LGRHLARRLV++G  DVF+VPGDFNLTLLDHLIAEP L LVGCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLPVICI GGPNSNDYGTNRILHHTIGLPDF+QELRCFQ +TC QAVV NL DAHE IDTAI+TAL+ESKPVY+SISCNLPG+PHPTF+RDPVPFFLAP++SN++GLEAAVEAT +FLNKAVKPVLVGGP +RVAKA KA
Sbjct:   18 GAVGCPASAVGCPMTSARPAPVSAGEA--SLGRHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRLVGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIAGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCHQAVVTNLEDAHEQIDTAIATALRESKPVYLSISCNLPGLPHPTFSRDPVPFFLAPRLSNKMGLEAAVEATVEFLNKAVKPVLVGGPKLRVAKAGKA 271          
BLAST of CN189785 vs. ExPASy Swiss-Prot
Match: PDC1_MAIZE (Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PDC1 PE=2 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 2.311e-111
Identity = 196/254 (77.17%), Postives = 221/254 (87.01%), Query Frame = 3
Query:   30 MDTANAMGSTGQPGSAPAPVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKA 791
            +  AN+      P +A A +    +  TLGRHLARRLV+IGA DVF+VPGDFNLTLLD+LIAEP L LVGCCNELNAGYAADGYARSRGVGAC VTFTVGGLSVLNAIAGAYSENLPV+CIVGGPNSNDYGTNRILHHTIGLPDF+QELRCFQ ITC QA++NNL DAHE IDTAI+TAL+ESKPVYIS+SCNL G+ HPTF+RDPVP F++P++SN+  LE AVEA ADFLNKAVKPV+VGGP IRVAKA++A
Sbjct:   24 LPVANSHAIIATPAAAAATLAPAGA--TLGRHLARRLVQIGASDVFAVPGDFNLTLLDYLIAEPGLTLVGCCNELNAGYAADGYARSRGVGACAVTFTVGGLSVLNAIAGAYSENLPVVCIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTITCYQAIINNLDDAHEQIDTAIATALRESKPVYISVSCNLAGLSHPTFSRDPVPMFISPRLSNKANLEYAVEAAADFLNKAVKPVMVGGPKIRVAKAREA 275          
BLAST of CN189785 vs. ExPASy Swiss-Prot
Match: PDC2_TOBAC (Pyruvate decarboxylase isozyme 2 OS=Nicotiana tabacum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 1.956e-110
Identity = 197/251 (78.49%), Postives = 218/251 (86.85%), Query Frame = 3
Query:   30 MDTANAMGSTGQPGSAPAPVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKA 782
            MD + A G++    S  + V       TLGRHLARRLVEIG +DVFSVPGDFNLTLLDHLIAEP L  +GCCNELNAGYAADGYAR+RGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPN+NDYGTNRILHHTIGLPDF+QELRCFQ +TC QAVVNNL DAHE ID AISTALKESKPVYISISCNLP IPHPTF+RDP+PF L+P++SN+ GLEAAV+A   FL+KAVKPV++GGP +RVAKA
Sbjct:    1 MDGSVAKGTSCIQDSQSSSVIANTDA-TLGRHLARRLVEIGIQDVFSVPGDFNLTLLDHLIAEPRLKNIGCCNELNAGYAADGYARARGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNTNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLDDAHEQIDRAISTALKESKPVYISISCNLPAIPHPTFSRDPIPFSLSPRLSNKRGLEAAVDAAVTFLSKAVKPVMIGGPKLRVAKA 250          
BLAST of CN189785 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSJ (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. japonica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 397.512 bits (1020), Expect = 4.358e-110
Identity = 191/231 (82.68%), Postives = 212/231 (91.77%), Query Frame = 3
Query:   99 ASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKA 791
            A+  TLGRHLARRLV+IGA DVF+VPGDFNLTLLD+LIAEP L L+GCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDF+QELRCFQ ITC QAV+NNL DAHE IDTAI+TAL+ESKPVYIS+ CNL G+ HPTF+R+PVP F++P++SN+  LE AVEA ADFLNKAVKPV+VGGP IRVAKA+KA
Sbjct:   40 AAGATLGRHLARRLVQIGATDVFAVPGDFNLTLLDYLIAEPGLKLIGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTITCYQAVINNLDDAHEQIDTAIATALRESKPVYISVGCNLAGLSHPTFSREPVPLFISPRLSNKANLEYAVEAAADFLNKAVKPVMVGGPKIRVAKAKKA 270          
BLAST of CN189785 vs. ExPASy Swiss-Prot
Match: PDC1_ORYSI (Pyruvate decarboxylase isozyme 1 OS=Oryza sativa subsp. indica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 397.512 bits (1020), Expect = 4.358e-110
Identity = 191/231 (82.68%), Postives = 212/231 (91.77%), Query Frame = 3
Query:   99 ASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKA 791
            A+  TLGRHLARRLV+IGA DVF+VPGDFNLTLLD+LIAEP L L+GCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDF+QELRCFQ ITC QAV+NNL DAHE IDTAI+TAL+ESKPVYIS+ CNL G+ HPTF+R+PVP F++P++SN+  LE AVEA ADFLNKAVKPV+VGGP IRVAKA+KA
Sbjct:   40 AAGATLGRHLARRLVQIGATDVFAVPGDFNLTLLDYLIAEPGLKLIGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTITCYQAVINNLDDAHEQIDTAIATALRESKPVYISVGCNLAGLSHPTFSREPVPLFISPRLSNKANLEYAVEAAADFLNKAVKPVMVGGPKIRVAKAKKA 270          
BLAST of CN189785 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSJ (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. japonica GN=PDC3 PE=2 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 2.644e-107
Identity = 189/248 (76.21%), Postives = 213/248 (85.89%), Query Frame = 3
Query:   48 MGSTGQPGSAP---APVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKA 782
            M S G  G +P   A V   +   TLG HLARRLV++G  DVF+VPGDFNLTLLDHLIAEP L +VGCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAI GAYSENLP+ICIVGGPNSNDYGTNRILHHTIGLPDF+QELRCFQ +TC QAVVNNL DAH+ ID AISTA++ESKPVYIS+SCNLP +PHPTF+RDPVP+FL+P++SNQ  L AA++AT  FL+KAVKPVLV GP +RVAKA
Sbjct:    1 MESNGGGGGSPKEAAVVVPSSGDATLGGHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRVVGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIGGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQPLTCYQAVVNNLDDAHDQIDRAISTAIRESKPVYISVSCNLPAVPHPTFSRDPVPYFLSPRLSNQASLHAALDATLAFLDKAVKPVLVAGPKLRVAKA 248          
BLAST of CN189785 vs. ExPASy Swiss-Prot
Match: PDC3_ORYSI (Pyruvate decarboxylase isozyme 3 OS=Oryza sativa subsp. indica GN=PDC3 PE=2 SV=2)

HSP 1 Score: 388.267 bits (996), Expect = 2.644e-107
Identity = 189/248 (76.21%), Postives = 213/248 (85.89%), Query Frame = 3
Query:   48 MGSTGQPGSAP---APVRGGASVGTLGRHLARRLVEIGAKDVFSVPGDFNLTLLDHLIAEPELNLVGCCNELNAGYAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKA 782
            M S G  G +P   A V   +   TLG HLARRLV++G  DVF+VPGDFNLTLLDHLIAEP L +VGCCNELNAGYAADGYAR+RGVGAC VTFTVGGLSVLNAI GAYSENLP+ICIVGGPNSNDYGTNRILHHTIGLPDF+QELRCFQ +TC QAVVNNL DAH+ ID AISTA++ESKPVYIS+SCNLP +PHPTF+RDPVP+FL+P++SNQ  L AA++AT  FL+KAVKPVLV GP +RVAKA
Sbjct:    1 MESNGGGGGSPKEAAVVVPSSGDATLGGHLARRLVQVGVSDVFAVPGDFNLTLLDHLIAEPGLRVVGCCNELNAGYAADGYARARGVGACAVTFTVGGLSVLNAIGGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQPLTCYQAVVNNLDDAHDQIDRAISTAIRESKPVYISVSCNLPAVPHPTFSRDPVPYFLSPRLSNQASLHAALDATLAFLDKAVKPVLVAGPKLRVAKA 248          
BLAST of CN189785 vs. ExPASy Swiss-Prot
Match: PDC1_TOBAC (Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nicotiana tabacum GN=PDC1 PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 2.038e-83
Identity = 149/175 (85.14%), Postives = 163/175 (93.14%), Query Frame = 3
Query:  267 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPVICIVGGPNSNDYGTNRILHHTIGLPDFTQELRCFQAITCSQAVVNNLGDAHELIDTAISTALKESKPVYISISCNLPGIPHPTFARDPVPFFLAPKVSNQLGLEAAVEATADFLNKAVKPVLVGGPNIRVAKAQKA 791
            AADGYAR+RGVGACVVTFTVGGLSVLNAIAGAYSENLP+ICIVGGPNSNDYGTNRILHHTIGL DF+QE RCFQ +TC +AVVNNL DAHELIDTA+STALKESKPVYISI CNLPGIPHPTF+R+PVPF L+P++SN +GLEAAVEA A+FLNKAVKPVLVGGP +RVAKA  A
Sbjct:    1 AADGYARARGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLQDFSQEPRCFQTVTCYRAVVNNLEDAHELIDTAVSTALKESKPVYISIGCNLPGIPHPTFSREPVPFALSPRLSNMMGLEAAVEAAAEFLNKAVKPVLVGGPKMRVAKASDA 175          
The following BLAST results are available for this feature:
BLAST of CN189785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PDC1_PEA8.466e-12283.72Pyruvate decarboxylase isozyme 1 OS=Pisum sativum ... [more]
PDC2_ORYSJ9.066e-11680.08Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC2_ORYSI9.066e-11680.08Pyruvate decarboxylase isozyme 2 OS=Oryza sativa s... [more]
PDC1_MAIZE2.311e-11177.17Pyruvate decarboxylase isozyme 1 OS=Zea mays GN=PD... [more]
PDC2_TOBAC1.956e-11078.49Pyruvate decarboxylase isozyme 2 OS=Nicotiana taba... [more]
PDC1_ORYSJ4.358e-11082.68Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC1_ORYSI4.358e-11082.68Pyruvate decarboxylase isozyme 1 OS=Oryza sativa s... [more]
PDC3_ORYSJ2.644e-10776.21Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]
PDC3_ORYSI2.644e-10776.21Pyruvate decarboxylase isozyme 3 OS=Oryza sativa s... [more]
PDC1_TOBAC2.038e-8385.14Pyruvate decarboxylase isozyme 1 (Fragment) OS=Nic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002G16_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002G16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189785 ID=CN189785; Name=CN189785; organism=Citrus sinensis; type=EST; length=792bp
GAGGCTTGTTATACAATATACGCTTACACATGGACACTGCAAACGCAATG
GGCTCAACGGGTCAACCCGGCTCAGCTCCAGCTCCAGTCCGCGGCGGGGC
CTCCGTCGGCACGCTAGGCCGGCACCTGGCGCGGCGGCTGGTGGAGATCG
GCGCGAAGGATGTCTTCTCGGTTCCGGGAGACTTTAACTTGACGCTCTTG
GATCATCTCATAGCGGAGCCGGAGTTAAACTTGGTCGGCTGCTGCAACGA
GCTGAACGCCGGATACGCCGCCGACGGCTACGCACGCTCCAGAGGCGTGG
GGGCCTGTGTGGTGACGTTCACTGTGGGTGGCCTTAGCGTCTTGAACGCC
ATTGCTGGCGCTTACAGTGAGAATTTGCCCGTTATCTGTATCGTCGGCGG
CCCTAATTCTAATGATTATGGGACTAACAGGATCTTGCATCATACCATTG
GCTTGCCTGATTTCACCCAAGAACTTAGATGCTTCCAGGCTATCACCTGT
TCTCAGGCTGTGGTGAATAATCTGGGCGATGCACATGAGCTCATTGACAC
AGCAATCTCTACTGCTTTGAAGGAAAGCAAACCGGTTTATATCAGTATAA
GCTGTAATTTGCCTGGAATTCCTCATCCCACATTTGCTAGGGACCCCGTC
CCCTTCTTTCTTGCTCCTAAGGTAAGCAATCAATTAGGATTAGAAGCAGC
CGTGGAAGCGACTGCTGATTTTTTGAATAAAGCTGTGAAGCCTGTCCTTG
TTGGGGGCCCAAATATAAGGGTTGCTAAGGCACAAAAAGCCT
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