CN189772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189772 vs. ExPASy Swiss-Prot
Match: PALA_CRYNE (pH-response regulator protein palA/RIM20 OS=Cryptococcus neoformans GN=RIM20 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13 Identity = 60/220 (27.27%), Postives = 94/220 (42.73%), Query Frame = 3 Query: 66 IESALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSVGS-------------YEDLFRKEISKYDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYRASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEDVQRQMAGLNFQDRKTSGSYDGSYPTVGQP 686 +E +P P SL + V L+ SL +L+ A RA L +++ DDI P+++ +EDLF K + KY + LL QI+ QNE F + + RE+ + + A K+REI +N EG+KFY + + + K C F+ TR I +M Q+QM ++ ++ Y P QP Sbjct: 555 MEDYVPGTTSPSGSLPPS----VRPLRASLEELDDRIAHRARLVREARQISAADDIRPEVLKEAAKLAHGGSGDVKTEWFEDLFEKGLEKYMGVKREMDEEVAKHDELLEQIRTQNESFLSERKDDPIIKERERRLQDMDLAYWKWREIVDNAEEGIKFYNSFAEMLHGFKAACGQFLNTRRIDVGQMTTQFQQQM-NVSEPQQQPEPRYQSPSPQSFQP 769
BLAST of CN189772 vs. ExPASy Swiss-Prot
Match: ALIX_DICDI (ALG-2 interacting protein X OS=Dictyostelium discoideum GN=alxA PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13 Identity = 60/230 (26.09%), Postives = 109/230 (47.39%), Query Frame = 3 Query: 9 IERSVRDH-SALMSILDRRPIESALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSVGSYEDLFRKEISKYDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYRAS-REKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEDVQRQMAGLNFQDRKTSGSYDGSYPTVGQPHQ 692 I + DH +++ + ++ I + LPT +L + + A + +L + L+ L A R + + LK + +KDDI KL++ ++ +EI KY+ + L+ I+ +NE+F+ N + + + RE+ ++ A Y E+K N++EG +FY+ Q+ + +C DF R E IE ++ AG+N TS S P P+Q Sbjct: 501 IRKKFEDHKNSIQELENQTEIIALLPT-----NNLPSGKIAEIASLTVLMNDLDALMANRESIAEKLKNLCKKDDITLKLLSPQKDKSLIYAEEIQKYEPLQMSLNESFLKQQKLIEDIRKENEKFT---NQKSKQGNQREEILQKYANAYKVYNELKANLDEGTQFYLNFQEILNKFLNRCKDFTTGRE---NEKIELKRQIEAGVNPHSPLTSPSPSLQSPVNNYPNQ 719
BLAST of CN189772 vs. ExPASy Swiss-Prot
Match: PDC6I_RAT (Programmed cell death 6-interacting protein OS=Rattus norvegicus GN=Pdcd6ip PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 51/190 (26.84%), Postives = 92/190 (48.42%), Query Frame = 3 Query: 66 IESALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSVG-----SYEDLFRKEISK-YDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYRASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEDVQRQMA 617 + +A+P+ A P ++ +E +V LK L L+ + +R GLE+ LK + D+ K +T++ + E L E+ + Y + LL IQ ++EFS + + RE+ K + A + E+ N+ EG KFY L + + + +CSD V R + E+++D+Q+ +A Sbjct: 535 LNAAIPS-ANPAKTMQGSE--VVNVLKSLLSNLDEIKKEREGLENDLKSVNF--DMTSKFLTALAQDGVINEEALSVTELDRIYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNSEASLREEVLKNLATAYDNFVELVANLKEGTKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIA 719
BLAST of CN189772 vs. ExPASy Swiss-Prot
Match: PDC6I_HUMAN (Programmed cell death 6-interacting protein OS=Homo sapiens GN=PDCD6IP PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.728e-12 Identity = 51/190 (26.84%), Postives = 92/190 (48.42%), Query Frame = 3 Query: 66 IESALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSVG-----SYEDLFRKEISK-YDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYRASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEDVQRQMA 617 + +A+P+ A P ++ +E +V LK L L+ + +R GLE+ LK + D+ K +T++ + E L E+ + Y + LL IQ ++EFS + + RE+ K + A + E+ N+ EG KFY L + + + +CSD V R + E+++D+Q+ +A Sbjct: 530 LNAAIPS-ANPAKTMQGSE--VVNVLKSLLSNLDEVKKEREGLENDLKSVNF--DMTSKFLTALAQDGVINEEALSVTELDRVYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNEANLREEVLKNLATAYDNFVELVANLKEGTKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIA 714
BLAST of CN189772 vs. ExPASy Swiss-Prot
Match: PDC6I_MOUSE (Programmed cell death 6-interacting protein OS=Mus musculus GN=Pdcd6ip PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.830e-11 Identity = 50/190 (26.32%), Postives = 91/190 (47.89%), Query Frame = 3 Query: 66 IESALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSVG-----SYEDLFRKEISK-YDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYRASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEDVQRQMA 617 + +A+P+ A P ++ +E +V LK L L+ + +R LE+ LK + D+ K +T++ + E L E+ + Y + LL IQ ++EFS + + RE+ K + A + E+ N+ EG KFY L + + + +CSD V R + E+++D+Q+ +A Sbjct: 530 VNAAIPS-ANPAKTMQGSE--VVSVLKSLLSNLDEIKKERESLENDLKSVNF--DMTSKFLTALAQDGVINEEALSVTELDRIYGGLTSKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNEANLREEVLKNLATAYDNFVELVANLKEGTKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIA 714
BLAST of CN189772 vs. ExPASy Swiss-Prot
Match: PALA_ASPOR (pH-response regulator protein palA/RIM20 OS=Aspergillus oryzae GN=palA PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11 Identity = 53/224 (23.66%), Postives = 91/224 (40.62%), Query Frame = 3 Query: 9 IERSVRDHSALMSILD--RRPIESALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDI--------------LPKLMTSVGSYEDLFRKEISKYDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYRASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEDVQ--RQMAGLN 626 +E+ +RD A+ +L R +E +P+ R + + ++I L+ L ++ L +R LK+ R DDI P +EDLF +++ YD + Q++ N F+ + REK ++++ KY+EI NI G KFY L + + C FV R ++ ++ D+ MA LN Sbjct: 516 VEQKLRDSEAVFRVLTGTNRDLEMYVPSSRRAAIPPEVERESI--RLRGCLSEVSRLENRRKRRAQALKDKARTDDISKLQGWEAARLEREFPMQAIQASQFEDLFEEQLHLYDTDLEMVTQEQHEQDQISAQVREANRAFTRAHTGDASTKEREKALQELENGYLKYKEIISNIEVGRKFYNDLAKIVGRFRDDCKAFVHQRRMEASQIEGDITSVAAMASLN 737 The following BLAST results are available for this feature:
BLAST of CN189772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189772 ID=CN189772; Name=CN189772; organism=Citrus sinensis; type=EST; length=693bpback to top |