DR908869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908869 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.019e-36 Identity = 75/86 (87.21%), Postives = 83/86 (96.51%), Query Frame = 2 Query: 2 FGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 259 FGHKATSAGLK+QEAINFLEKKMKNDP+FT++ETVQTAIS LQSVLQEDFKA+EIEVGVV K+NPEFRVL+ +EIDEHLTAISERD Sbjct: 161 FGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLTTDEIDEHLTAISERD 246
BLAST of DR908869 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.605e-36 Identity = 76/86 (88.37%), Postives = 81/86 (94.19%), Query Frame = 2 Query: 2 FGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 259 FGHKATSAG KEQEAINFLEKKMKNDPAF+++ETVQTAIS LQSVLQEDFKASEIEVGVV KE+P FRVL+ EEIDEHLTAISERD Sbjct: 161 FGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGVVKKEDPIFRVLTTEEIDEHLTAISERD 246
BLAST of DR908869 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 2.775e-34 Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 2 Query: 2 FGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 259 +GHKATSAG+KEQEA+NFLEKKMK +P+FTF ETVQTAIS LQSVLQEDFKA+EIEVGVV ENPEFR L+ EEI+EHLTAISERD Sbjct: 161 YGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEHLTAISERD 246
BLAST of DR908869 vs. ExPASy Swiss-Prot
Match: PSA6B_ARATH (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.989e-32 Identity = 69/86 (80.23%), Postives = 77/86 (89.53%), Query Frame = 2 Query: 2 FGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 259 +GHKATSAG+KEQEA+NFLEKKMK +PAFT+ ETVQTAIS LQSVLQEDFKA+EIEVGVV ++P FR L EEIDEHLTAISERD Sbjct: 161 YGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEHLTAISERD 246
BLAST of DR908869 vs. ExPASy Swiss-Prot
Match: PSA6_ORYSJ (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica GN=PAA1 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.392e-32 Identity = 69/86 (80.23%), Postives = 78/86 (90.70%), Query Frame = 2 Query: 2 FGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 259 FGHKATSAGLKEQEAINFLEKKMK+DP F+++ETVQ AIS LQSVLQEDFKA+EIEVGVV K++ FR L+ EEID+HLTAISERD Sbjct: 161 FGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISALQSVLQEDFKATEIEVGVVRKDDRVFRALTTEEIDQHLTAISERD 246
BLAST of DR908869 vs. ExPASy Swiss-Prot
Match: PSA6_RAT (Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.518e-21 Identity = 50/85 (58.82%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 5 GHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 259 G KAT+AG+K+ E+ +FLEKK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID HL A++ERD Sbjct: 162 GFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAERD 246
BLAST of DR908869 vs. ExPASy Swiss-Prot
Match: PSA6_MOUSE (Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.518e-21 Identity = 50/85 (58.82%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 5 GHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 259 G KAT+AG+K+ E+ +FLEKK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID HL A++ERD Sbjct: 162 GFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAERD 246
BLAST of DR908869 vs. ExPASy Swiss-Prot
Match: PSA6_HUMAN (Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.518e-21 Identity = 50/85 (58.82%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 5 GHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 259 G KAT+AG+K+ E+ +FLEKK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID HL A++ERD Sbjct: 162 GFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAERD 246
BLAST of DR908869 vs. ExPASy Swiss-Prot
Match: PSA6_BOVIN (Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.518e-21 Identity = 50/85 (58.82%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 5 GHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 259 G KAT+AG+K+ E+ +FLEKK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID HL A++ERD Sbjct: 162 GFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALAERD 246
BLAST of DR908869 vs. ExPASy Swiss-Prot
Match: PSA6_DICDI (Proteasome subunit alpha type-6 OS=Dictyostelium discoideum GN=psmA6 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.111e-18 Identity = 45/90 (50.00%), Postives = 66/90 (73.33%), Query Frame = 2 Query: 5 GHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQT-----AISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 259 G+KAT+AG KEQE+ NFLEKK K++P + ET+Q AISTLQSVL D K+S++E+G+ + +N +F +++ E+ID LT ++ERD Sbjct: 161 GYKATAAGEKEQESTNFLEKKFKSNPQLSKDETIQVSLIVMAISTLQSVLGADLKSSDLEIGICTMDNRKFVIMTDEDIDSQLTKLAERD 250 The following BLAST results are available for this feature:
BLAST of DR908869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908869 ID=DR908869; Name=DR908869; organism=Citrus sinensis; type=EST; length=570bpback to top |