CN189762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189762 vs. ExPASy Swiss-Prot
Match: SNP33_ARATH (SNAP25 homologous protein SNAP33 OS=Arabidopsis thaliana GN=SNAP33 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.654e-40 Identity = 88/143 (61.54%), Postives = 108/143 (75.52%), Query Frame = 3 Query: 237 MFGLKKSPLRVGRHNSVDPGHQVSSRSNPFDSDDELDNKQTLKPSKRTSSEPNLTTSKVSTNPFDDDDIKENTAVSS-YSLTSAARNKYRNDFRDSGGLENQSVQELEDYAVYKAEDTTKQVHGCLKIAEKIREDATKTLVSL 662 MFGL+KSP + +HNSVD SS+ NPFDSDDE DNK TL PSKRT+SEP+L TNPF + +++ + SS SL S ++ +Y+N+FRDSGG+ENQSVQELE YAVYKAE+TTK V GCLK+AE IR DAT+TLV L Sbjct: 1 MFGLRKSPANLPKHNSVD---LKSSKPNPFDSDDESDNKHTLNPSKRTTSEPSLADM---TNPFGGERVQKGDSSSSKQSLFSNSKYQYKNNFRDSGGIENQSVQELEGYAVYKAEETTKSVQGCLKVAEDIRSDATRTLVML 137
BLAST of CN189762 vs. ExPASy Swiss-Prot
Match: SNP30_ARATH (Putative SNAP25 homologous protein SNAP30 OS=Arabidopsis thaliana GN=SNAP30 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.385e-17 Identity = 52/119 (43.70%), Postives = 66/119 (55.46%), Query Frame = 3 Query: 306 SSRSNPFDSDDELDNKQTLKPSKRTSSEPNLTTSKVSTNPFDDDDIKENTAVSSYSLTSAARNKYRNDFRDSGGLENQSVQELEDYAVYKAEDTTKQVHGCLKIAEKIREDATKTLVSL 662 S +N ++ + T+ +RTSSEP L T FDDDD KY+N F DSGGL++Q+ +ELE YAVYKAE+TTK V+ CLKIAE IR D +TL L Sbjct: 7 SPGNNKLPNESSNNKGGTITAGRRTSSEPILITPD-----FDDDD------------------KYKNGFNDSGGLQSQTTEELEKYAVYKAEETTKGVNNCLKIAEDIRSDGARTLEML 102
BLAST of CN189762 vs. ExPASy Swiss-Prot
Match: SNP29_ARATH (SNAP25 homologous protein SNAP29 OS=Arabidopsis thaliana GN=SNAP29 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.326e-15 Identity = 49/119 (41.18%), Postives = 62/119 (52.10%), Query Frame = 3 Query: 306 SSRSNPFDSDDELDNKQTLKPSKRTSSEPNLTTSKVSTNPFDDDDIKENTAVSSYSLTSAARNKYRNDFRDSGGLENQSVQELEDYAVYKAEDTTKQVHGCLKIAEKIREDATKTLVSL 662 +S NPFD + E S NPFDDDD + ++ + + SGG ENQ+VQELE YAVY +E+TTK V GCLK+AE+IR DA+KTLV L Sbjct: 5 NSSWNPFDDEKE-------------------AAKSFSLNPFDDDDDDKEV-----------EKRFTSSLKPSGGKENQTVQELESYAVYNSEETTKTVQGCLKVAEEIRCDASKTLVML 93 The following BLAST results are available for this feature:
BLAST of CN189762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189762 ID=CN189762; Name=CN189762; organism=Citrus sinensis; type=EST; length=663bpback to top |